Protein Alignment koko and SSN8

DIOPT Version :10

• Sequence 1: NP_732338.1
• Gene: koko / 14462485
• FlyBaseID: FBgn0264816
• Length: 259
• Species: Drosophila melanogaster
• Sequence 2: NP_014373.3
• Gene: SSN8 / 855706
• SGDID: S000004970
• Length: 323
• Species: Saccharomyces cerevisiae
• Alignment Length: 228
• Identity: 46/228 - (20%)
• Similarity: 94/228 - (41%)
• Gaps: 48/228 - (21%)

  Fly     4 VLDVMSMQQHVELNKAQTMKPIDYRKM--NKPGVVPMY----IFECAAKLKMKPLTAACAAIVFH 62
            |:|  |.|..:|.:..:.: ||.:|.:  :|...:.:|    |.:...:|.::....|.|.|...
Yeast    43 VMD--SKQNGIEQSITKNI-PITHRDLHYDKDYNLRIYCYFLIMKLGRRLNIRQYALATAHIYLS 104

  Fly    63 RFFREVKASDYDEFLIAAGSLYLAGKIKEDESVKIRDVINVAYCTLNR--GNDPVDLND-EYWSM 124
            ||..:....:.:.:::....:|||.|::|.... ||.:::.|......  ..||..:.: |::.:
Yeast   105 RFLIKASVREINLYMLVTTCVYLACKVEECPQY-IRTLVSEARTLWPEFIPPDPTKVTEFEFYLL 168

  Fly   125 RDAIVQAELLITRTLCFDLNIDLAHKY-----LLHYMK------TLQDWVGTEVWNSVPIAKAAA 178
            .:  :::.|::            .|.|     ::..:|      ||........|:.:     ..
Yeast   169 EE--LESYLIV------------HHPYQSLKQIVQVLKQPPFQITLSSDDLQNCWSLI-----ND 214

  Fly   179 SYLQDFHHSANILKYKPTHVAIGCLSLALQTYG 211
            ||:.|.|     |.|.|..:|:.||.:.:..:|
Yeast   215 SYINDVH-----LLYPPHIIAVACLFITISIHG 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
koko	NP_732338.1	CYCLIN_CCNM_CCNQ_rpt1	32..142	CDD:410237	21/116 (18%)
		CYCLIN_CCNM_CCNQ_rpt2	147..252	CDD:410238	17/76 (22%)
SSN8	NP_014373.3	CCL1	27..323	CDD:227640	46/228 (20%)