Protein Alignment koko and CYCT1;1

DIOPT Version :10

• Sequence 1: NP_732338.1
• Gene: koko / 14462485
• FlyBaseID: FBgn0264816
• Length: 259
• Species: Drosophila melanogaster
• Sequence 2: NP_174775.1
• Gene: CYCT1;1 / 840436
• AraportID: AT1G35440
• Length: 247
• Species: Arabidopsis thaliana
• Alignment Length: 215
• Identity: 52/215 - (24%)
• Similarity: 100/215 - (46%)
• Gaps: 21/215 - (9%)

  Fly    39 YIFECAAKLKMKPLTAACAAIVFHRFFREVKASDYDEFLIAAGSLYLAGKIKEDESVKIRDVINV 103
            ::.|...:|.....|.|.|.::..|||.....:..|...:|...:::|||: |.......||:.|
plant    40 FLQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKV-EGSPRPAGDVVFV 103

  Fly   104 AYCTL-NRGNDPVDLNDEYWSMRDAIVQAELLITRTLCFDLNIDLAHKYLLHYMKTLQDWV--GT 165
            :|..| |:  :|  |.|.:..::..::..|.|:..||..||.|:  |.|     |.:.|||  ..
plant   104 SYRVLFNK--EP--LRDVFERLKMTVLTGEKLVLSTLECDLEIE--HPY-----KLVMDWVKRSV 157

  Fly   166 EVWNSVPIAKAAASYLQDFHHSANILKYKPTHVAIGCLSLALQTYGIQVPLTDESDESAMWYKPL 230
            :..:...:.:||.:::.|...::..|::.|:.:|...:.:.|....:.:|    .|....|::..
plant   158 KTEDGRRLCQAAFNFVNDSLRTSLCLQFGPSQIASAAIYIGLSMCKMTLP----CDGDKAWWREF 218

  Fly   231 VKDFTRENQWEIIENVIEVY 250
              |.|:...|||.:.::::|
plant   219 --DVTKRQLWEICDQMLDLY 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
koko	NP_732338.1	CYCLIN_CCNM_CCNQ_rpt1	32..142	CDD:410237	27/103 (26%)
		CYCLIN_CCNM_CCNQ_rpt2	147..252	CDD:410238	22/106 (21%)
CYCT1;1	NP_174775.1	CYCLIN_SF	23..139	CDD:477360	27/103 (26%)
		CYCLIN_AcCycT_rpt2	143..237	CDD:410291	22/107 (21%)