Protein Alignment koko and Ccnl1

DIOPT Version :10

• Sequence 1: NP_732338.1
• Gene: koko / 14462485
• FlyBaseID: FBgn0264816
• Length: 259
• Species: Drosophila melanogaster
• Sequence 2: NP_064321.2
• Gene: Ccnl1 / 56706
• MGIID: 1922664
• Length: 532
• Species: Mus musculus
• Alignment Length: 259
• Identity: 59/259 - (22%)
• Similarity: 121/259 - (46%)
• Gaps: 36/259 - (13%)

  Fly     9 SMQQHVELNKAQTMKPIDYRKMNKPGVVPMYIFECAAKLKMKPLTAACAAIVFHRFFREVKASDY 73
            |||..::|.....::.:....:...|::          |::..:..|...::|||||.......:
Mouse    75 SMQDGLDLPSETDLRILGCELIQAAGIL----------LRLPQVAMATGQVLFHRFFYSKSFVKH 129

  Fly    74 DEFLIAAGSLYLAGKIKEDESVKIRDVINVAYCTLN-RGN---DPVDLNDEYWSMRDAIVQAELL 134
            ...::|...:.||.|| |:...:|||||||.:.... ||.   .|:.|:..|.:.::.:::||..
Mouse   130 SFEIVAMACINLASKI-EEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERR 193

  Fly   135 ITRTLCFDLNIDLAHKYLLHYMKTLQDWVGTEVWNSVPIAKAAASYLQDFHHSANILKYKPTHVA 199
            :.:.|.|.:::...||.::.|::.|      |...:..:.:.|.:|:.|...:...::::|..:|
Mouse   194 VLKELGFCVHVKHPHKIIVMYLQVL------ECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIA 252

  Fly   200 IGCLSLALQTYGIQVPL-----------TDESDESAMWYKPLVKDFTREN-QWEIIENVIEVYK 251
            ..|:.||.:  .:|:||           |.|.:...:..:.| :.:||:. .:|::|..:|..|
Mouse   253 CACIYLAAR--ALQIPLPTRPHWFLLFGTTEEEIQEICIETL-RLYTRKKPNYELLEKEVEKRK 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
koko	NP_732338.1	CYCLIN_CCNM_CCNQ_rpt1	32..142	CDD:410237	29/113 (26%)
		CYCLIN_CCNM_CCNQ_rpt2	147..252	CDD:410238	25/117 (21%)
Ccnl1	NP_064321.2	CYCLIN_SF	46..201	CDD:477360	33/136 (24%)
		Cyclin-like 1	94..196		28/112 (25%)
		CYCLIN_SF	205..327	CDD:477360	25/118 (21%)
		Cyclin-like 2	209..293		18/92 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	332..532
		RS	396..438