Protein Alignment Polr2D and rpb-4

DIOPT Version :10

• Sequence 1: NP_001014633.2
• Gene: Polr2D / 14462484
• FlyBaseID: FBgn0263757
• Length: 139
• Species: Drosophila melanogaster
• Sequence 2: NP_001370397.1
• Gene: rpb-4 / 174208
• WormBaseID: WBGene00018391
• Length: 144
• Species: Caenorhabditis elegans
• Alignment Length: 131
• Identity: 68/131 - (51%)
• Similarity: 97/131 - (74%)
• Gaps: 2/131 - (1%)

  Fly    10 VDEDAADLQFPKEFE--NAETLLISEVHMLLDHRKRQNESADEEQEFSEVFMKTYAYTDSFRKFK 72
            |:||||:.:||||||  ..:.||.:||::||:||::.:||.||.:|.||||:||..|.....:||
 Worm    14 VEEDAAECKFPKEFETTTCDALLTAEVYLLLEHRRQSSESKDEIEEMSEVFIKTLNYARRMSRFK 78

  Fly    73 NKETIMSARSLLMQKKLHKFELAALGNLCPEAPEEAKALIPSLEGRFEDEELRQILDDIGTKRSL 137
            |:|||.:.|::..:|.|||||:|.:.|||||..||||||:||||.:.|:.||.::|.|:.:||:.
 Worm    79 NRETIRAVRAIFSEKHLHKFEVAQIANLCPENAEEAKALVPSLENKIEESELEEVLKDLQSKRTF 143

  Fly   138 Q 138
            |
 Worm   144 Q 144

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2D	NP_001014633.2	RPOL4c	22..139	CDD:128904	60/119 (50%)
rpb-4	NP_001370397.1	RPOL4c	25..144	CDD:128904	60/118 (51%)