Protein Alignment Rpb4 and rpb-4

DIOPT Version :9

• Sequence 1: NP_001014633.2
• Gene: Rpb4 / 14462484
• FlyBaseID: FBgn0263757
• Length: 139
• Species: Drosophila melanogaster
• Sequence 2: NP_001370397.1
• Gene: rpb-4 / 174208
• WormBaseID: WBGene00018391
• Length: 144
• Species: Caenorhabditis elegans
• Alignment Length: 131
• Identity: 68/131 - (51%)
• Similarity: 97/131 - (74%)
• Gaps: 2/131 - (1%)

  Fly    10 VDEDAADLQFPKEFE--NAETLLISEVHMLLDHRKRQNESADEEQEFSEVFMKTYAYTDSFRKFK 72
            |:||||:.:||||||  ..:.||.:||::||:||::.:||.||.:|.||||:||..|.....:||
 Worm    14 VEEDAAECKFPKEFETTTCDALLTAEVYLLLEHRRQSSESKDEIEEMSEVFIKTLNYARRMSRFK 78

  Fly    73 NKETIMSARSLLMQKKLHKFELAALGNLCPEAPEEAKALIPSLEGRFEDEELRQILDDIGTKRSL 137
            |:|||.:.|::..:|.|||||:|.:.|||||..||||||:||||.:.|:.||.::|.|:.:||:.
 Worm    79 NRETIRAVRAIFSEKHLHKFEVAQIANLCPENAEEAKALVPSLENKIEESELEEVLKDLQSKRTF 143

  Fly   138 Q 138
            |
 Worm   144 Q 144

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb4	NP_001014633.2	RPOL4c	22..139	CDD:128904	60/119 (50%)
rpb-4	NP_001370397.1	RPOL4c	25..144	CDD:128904	60/118 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160164736
Domainoid	1	1.000	118	1.000	Domainoid score	I3678
eggNOG	1	0.900	-	-		E1_COG5250
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H37968
Inparanoid	1	1.050	143	1.000	Inparanoid score	I3049
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55689
OrthoDB	1	1.010	-	-		D1480091at2759
OrthoFinder	1	1.000	-	-		FOG0003764
OrthoInspector	1	1.000	-	-		oto17656
orthoMCL	1	0.900	-	-		OOG6_102742
Panther	1	1.100	-	-	LDO	PTHR21297
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1186
SonicParanoid	1	1.000	-	-		X4796
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	17	16.800