DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12256 and CG4477

DIOPT Version :10

Sequence 1:NP_650166.2 Gene:CG12256 / 14462452 FlyBaseID:FBgn0038002 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_648295.1 Gene:CG4477 / 39058 FlyBaseID:FBgn0035971 Length:315 Species:Drosophila melanogaster


Alignment Length:301 Identity:73/301 - (24%)
Similarity:129/301 - (42%) Gaps:41/301 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNGVTYFVLLLSSTLLALGGVQSKPMGNVIDLDKYFEEADLNSQERVVGGYDVPEDEYVPYQVSM 65
            |:....||||:.|..         |:.|.:........:.||..:|:..| |..||........:
  Fly     1 MSSQNLFVLLVISFF---------PLYNCLGDSPRNAFSSLNRVKRLSDG-DFDEDSIALSNYCV 55

  Fly    66 QFLTRSGKM----RHFCGGSLIAPNRVLTAAHCVNGQNASRIS-----VVAGIRDLN-----DSS 116
            ...:||.:.    .|||.|.::||..|:|:|||:..:....||     :|||  .||     .:.
  Fly    56 SLRSRSAEKFFGDNHFCSGVILAPMFVMTSAHCLINKRRVLISSRVLLIVAG--TLNRLKYIPNR 118

  Fly   117 GFRSQVQSYEMNENYQELVTSDIAILKIDPPFELDEKRVSTIDVS-GSDMVGADQEVLLTGWGSV 180
            .|.:.|....:.:::......|..:||:..||..:.:.:|...:. ...:.|...:|:  |||.:
  Fly   119 TFVTPVTHIWLPDSFTMRNKQDFGLLKVKNPFPRNNEHISIARLPVHPPLPGLKCKVM--GWGRM 181

  Fly   181 FHFGTGPFAKYPTVLQKLDYKTLSNSKCKETMTQLTDTEICALER---FGKGACNGDSGGPLVMK 242
            :.  .||.|.|   :..:|.:.:.:..|.:.:...:...:||::.   ..:..|.||.|.|: :.
  Fly   182 YK--GGPLASY---MLYIDVQVIDSEACAKWLRVPSVEHVCAVDSDDLTAQQPCGGDWGAPM-LH 240

  Fly   243 SGESYKQVGVVSYGTAFCASNNPDVYTRVSMFDGWIKERMV 283
            :|..|   |:|:.......|:.|.:||.|.....||.|:::
  Fly   241 NGTVY---GIVTILAGCGVSHLPSLYTNVHSNANWIHEKII 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12256NP_650166.2 COG5640 44..282 CDD:444365 63/255 (25%)
CG4477NP_648295.1 Tryp_SPc 55..276 CDD:238113 57/233 (24%)

Return to query results.
Submit another query.