DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12256 and CG8738

DIOPT Version :10

Sequence 1:NP_650166.2 Gene:CG12256 / 14462452 FlyBaseID:FBgn0038002 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_610403.1 Gene:CG8738 / 35855 FlyBaseID:FBgn0033321 Length:459 Species:Drosophila melanogaster


Alignment Length:291 Identity:75/291 - (25%)
Similarity:126/291 - (43%) Gaps:64/291 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SKPMGNVIDLDKYFEEADLNSQERVVGGYDVPEDEYVPYQVSMQFLTRSGKMRHFCGGSLIAPNR 87
            |.|.|....||.|      |:.|.|...:        |:.|::  :...|..  .|||:||.|..
  Fly   191 SNPKGLYYQLDGY------NNGESVFAEF--------PWMVAL--MDMEGNF--VCGGTLIHPQL 237

  Fly    88 VLTAAHCVNGQNASRISVVAGIRDLNDSSGFRSQVQSYEM--------NENYQEL-VTSDIAILK 143
            |||:||.|..::...:.|.||..|||.    ::::..|:|        :||:..| :.:|||::.
  Fly   238 VLTSAHNVFNRSEDSLLVRAGDWDLNS----QTELHPYQMRAISELHRHENFNNLTLYNDIALVV 298

  Fly   144 IDPPFELDEKRVSTIDVSGSDMVGADQEV-----LLTGWGSVFHFGTGPFAKYPT------VLQK 197
            ::.||:: ...:..|.:...:....:.|:     |.||||          .:|.|      :|::
  Fly   299 LERPFQV-APHIQPICLPPPETPQMEAELRSASCLATGWG----------LRYSTSRTMENLLKR 352

  Fly   198 LDYKTLSNSKCKETMT--------QLTDTEICALERFGKGACNGDSGGPL---VMKSGESYKQVG 251
            ::...:.:..|:..:.        .|..:..||....||..|.||.|.||   :....:.|:.||
  Fly   353 IELPAVDHESCQRLLRHTVLGRRYNLHPSFTCAGGVKGKDTCMGDGGSPLFCTLPGQKDRYQLVG 417

  Fly   252 VVSYGTAFCASNNPDVYTRVSMFDGWIKERM 282
            :||:|......:.|..||.|:....||.|::
  Fly   418 LVSWGIECAEKDVPAAYTNVAYLRNWIDEQV 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12256NP_650166.2 COG5640 44..282 CDD:444365 68/268 (25%)
CG8738NP_610403.1 CLIP_1 112..163 CDD:465709
Tryp_SPc 207..447 CDD:238113 67/266 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.