DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12256 and Tmprss4

DIOPT Version :10

Sequence 1:NP_650166.2 Gene:CG12256 / 14462452 FlyBaseID:FBgn0038002 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_663378.1 Gene:Tmprss4 / 214523 MGIID:2384877 Length:435 Species:Mus musculus


Alignment Length:313 Identity:88/313 - (28%)
Similarity:138/313 - (44%) Gaps:55/313 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FVLLLSSTLLALGGVQSKPMGNVIDL--DKYFEEADL--NSQE---------------------- 45
            |...|:.|.....|..|:|....:::  |:....|.:  ||||                      
Mouse   129 FTEALAKTACRQMGYDSQPAFRAVEIRPDQNLPVAQVTGNSQELQVQNGSRSCLSGSLVSLRCLD 193

  Fly    46 --------RVVGGYDVPEDEYVPYQVSMQFLTRSGKMRHFCGGSLIAPNRVLTAAHCVNGQ-NAS 101
                    |||||.:.|.|.: |:|||:|:     ..:|.||||::.|:.:||||||.... :.|
Mouse   194 CGKSLKTPRVVGGVEAPVDSW-PWQVSIQY-----NKQHVCGGSILDPHWILTAAHCFRKYLDVS 252

  Fly   102 RISVVAGIRDLNDSSGFR-SQVQSYEMNENYQELVTSDIAILKIDPPFELD-EKRVSTIDVSGSD 164
            ...|.||...|.:|.... :::...|.|..|.:  ..|||::|:..|.... ..|...:..|...
Mouse   253 SWKVRAGSNILGNSPSLPVAKIFIAEPNPLYPK--EKDIALVKLQMPLTFSGSVRPICLPFSDEV 315

  Fly   165 MVGADQEVLLTGWGSVFHFGTGPFAKYPTVLQKLDYKTLSNSKCKETMT---QLTDTEICA-LER 225
            :|.| ..|.:.|||.....|    .|...:|.:...:.:.:::|.....   ::|...:|| ..:
Mouse   316 LVPA-TPVWVIGWGFTEENG----GKMSDMLLQASVQVIDSTRCNAEDAYEGEVTAEMLCAGTPQ 375

  Fly   226 FGKGACNGDSGGPLVMKSGESYKQVGVVSYGTAFCASNNPDVYTRVSMFDGWI 278
            .||..|.|||||||:..| :.::.||:||:|......:.|.|||:|:.:..||
Mouse   376 GGKDTCQGDSGGPLMYHS-DKWQVVGIVSWGHGCGGPSTPGVYTKVTAYLNWI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12256NP_650166.2 COG5640 44..282 CDD:444365 78/272 (29%)
Tmprss4NP_663378.1 LDLa 56..90 CDD:238060
SRCR_2 106..195 CDD:470597 12/65 (18%)
Tryp_SPc 202..427 CDD:214473 74/238 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.