DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12256 and Prss48

DIOPT Version :9

Sequence 1:NP_650166.2 Gene:CG12256 / 14462452 FlyBaseID:FBgn0038002 Length:283 Species:Drosophila melanogaster
Sequence 2:XP_017446782.1 Gene:Prss48 / 108350052 RGDID:11436036 Length:308 Species:Rattus norvegicus


Alignment Length:294 Identity:86/294 - (29%)
Similarity:125/294 - (42%) Gaps:53/294 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLSSTLLALGGVQ-----SKPMGNVIDLDKYFEEADLNSQERVVGGYDVPEDEYVPYQVSMQFLT 69
            |:...||.||..|     .|.:.:|.....|        ..|:|||.......: |:|||::|  
  Rat     6 LMVLLLLLLGAYQGSLTKQKKLQSVCGRPVY--------SGRIVGGQGAALGHW-PWQVSLRF-- 59

  Fly    70 RSGKMRHFCGGSLIAPNRVLTAAHCVNGQNASRI-SVVAGIRDLNDSSGFRSQVQSYEMNENYQE 133
               ...|.||||||:.:.|:|||||:.....|.: ||..|..|.:.||.......|..:..:...
  Rat    60 ---DSTHICGGSLISNHWVMTAAHCIKKTWFSFLYSVWLGSIDRDYSSTGEEYYVSRIVIPSKHH 121

  Fly   134 LVTSDIAILKIDPPFELDEKRVSTIDV-------SGSDMVGADQEVLLTGWGSVFHFGTGPFAKY 191
            ....|||:||:       ..||:...:       :.|..:.......:||||.      .....|
  Rat   122 NTDGDIALLKL-------SSRVTFTSLVLPICLPNISKPLTVPASCWVTGWGQ------NQEGHY 173

  Fly   192 PTVLQKLDYKTLSNSKCKETMTQ----LTDTE-------ICALE-RFGKGACNGDSGGPLVMKSG 244
            |:.||:|:...::...|::....    |.|.|       :||.| :..|.:|.|||||||.....
  Rat   174 PSTLQELEVPIITGEACEQLYNPIGFFLPDLERIIKEDMLCAGEIQQSKDSCKGDSGGPLSCHID 238

  Fly   245 ESYKQVGVVSYGTAFCASNNPDVYTRVSMFDGWI 278
            ..:.|:||:|:|.. |..|.|.|||.|:.:..||
  Rat   239 GVWTQIGVISWGLE-CGKNLPGVYTNVTYYQKWI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12256NP_650166.2 Tryp_SPc 46..278 CDD:214473 75/251 (30%)
Tryp_SPc 47..280 CDD:238113 76/252 (30%)
Prss48XP_017446782.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.