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Protein Alignment Gapdhs and Gapdh1

DIOPT Version :9

Sequence 1:	NP_001277560.1	Gene:	Gapdhs / 14447	MGIID:	95653	Length:	440	Species:	Mus musculus
Sequence 2:	NP_001033936.1	Gene:	Gapdh1 / 35728	FlyBaseID:	FBgn0001091	Length:	332	Species:	Drosophila melanogaster

Alignment Length:	330	Identity:	224/330 - (67%)
Similarity:	269/330 - (81%)	Gaps:	1/330 - (0%)

- Green bases have known domain annotations that are detailed below.

Mouse   110 VGINGFGRIGRLVLRVCMEKGIRVVAVNDPFIDPEYMVYMFKYDSTHGRYKGNVEHKNGQLVVDN 174
            :||||||||||||||..::||..||||||||||..||||:||:||||||:||.|..:.|.|||:.
  Fly     4 IGINGFGRIGRLVLRAAIDKGASVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFLVVNG 68

Mouse   175 LEINTYQCKDPKEIPWSSIGNPYVVECTGVYLSIEAASAHISSGARRVVVTAPSPDAPMFVMGVN 239
            .:|..:..:||..|.|:|.|..||||.|||:.:|:.||.|:..||::|:::|||.||||||.|||
  Fly    69 QKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVN 133

Mouse   240 EKDYNPGSMTIVSNASCTTNCLAPLAKVIHENFGIVEGLMTTVHSYTATQKTVDGPSKKDWRGGR 304
            ...|:| .|.:||||||||||||||||||::||.||||||||||:.|||||||||||.|.||.||
  Fly   134 LDAYSP-DMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGR 197

Mouse   305 GAHQNIIPSSTGAAKAVGKVIPELKGKLTGMAFRVPTPNVSVVDLTCRLAKPASYSAITEAVKAA 369
            ||.|||||::||||||||||||.|.|||||||||||||||||||||.||.|.|:|..|...|:.|
  Fly   198 GAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGATYDEIKAKVEEA 262

Mouse   370 AKGPLAGILAYTEDQVVSTDFNGNPHSSIFDAKAGIALNDNFVKLVAWYDNEYGYSNRVVDLLRY 434
            :||||.|||.||:::||||||..:.|||:|||||||:|||.||||::|||||:||||||:||::|
  Fly   263 SKGPLKGILGYTDEEVVSTDFFSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLIKY 327

Mouse   435 MFSRE 439
            |.|::
  Fly   328 MQSKD 332

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.