DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRICKLE1 and prickle1

DIOPT Version :10

Sequence 1:NP_694571.2 Gene:PRICKLE1 / 144165 HGNCID:17019 Length:831 Species:Homo sapiens
Sequence 2:XP_012814522.1 Gene:prickle1 / 549693 XenbaseID:XB-GENE-486941 Length:871 Species:Xenopus tropicalis


Alignment Length:838 Identity:675/838 - (80%)
Similarity:750/838 - (89%) Gaps:12/838 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPLEMEPKMSKLAFGCQRSSTSDDDSGCALEEYAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGE 65
            |||||:.|:||..||||||||||||||||:|||.||||||||||:|||||||||.|||||||.||
 Frog    39 MPLEMDQKISKHTFGCQRSSTSDDDSGCAMEEYTWVPPGLRPEQVQLYFACLPEAKVPYVNSVGE 103

Human    66 KHRIKQLLYQLPPHDNEVRYCQSLSEEEKKELQVFSAQRKKEALGRGTIKLLSRAVMHAVCEQCG 130
            |.|||||||||||||||||||||||||||||||:|||||||||||||.||:||||||||:||:||
 Frog   104 KCRIKQLLYQLPPHDNEVRYCQSLSEEEKKELQMFSAQRKKEALGRGNIKMLSRAVMHAMCEKCG 168

Human   131 LKINGGEVAVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSACD 195
            .||||||:|:|.||||||||||||||||.||||||||||||||||||||||||||||||||||||
 Frog   169 EKINGGEIAIFVSRAGPGVCWHPSCFVCSTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSACD 233

Human   196 EIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGCFESLYAEYCETCGEHIGV 260
            ||||||||||||||||||.||.|.||||||||||||||||||||||||||.||||||:|||||||
 Frog   234 EIIFADECTEAEGRHWHMNHFSCYECETVLGGQRYIMKDGRPFCCGCFESHYAEYCESCGEHIGV 298

Human   261 DHAQMTYDGQHWHATEACFSCAQCKASLLGCPFLPKQGQIYCSKTCSLGEDVHASDSSDSAFQSA 325
            ||||||||||||||||.||||||||.||||||||||:|:|||||.||||||||||||||||||||
 Frog   299 DHAQMTYDGQHWHATETCFSCAQCKVSLLGCPFLPKKGRIYCSKACSLGEDVHASDSSDSAFQSA 363

Human   326 RSRDSRRSVRMGKSSRSADQCRQSLLLSPALNYKFPGLSGNADDTLSRKLDDLSLSRQGTSFASE 390
            |||:|||||||||||||||||||||||||||||||||:|||||||||||:||||:||||..| ..
 Frog   364 RSRESRRSVRMGKSSRSADQCRQSLLLSPALNYKFPGMSGNADDTLSRKMDDLSISRQGAGF-DN 427

Human   391 EFWKGRVEQETPEDPEEWADHEDYMTQLLLKFGDKSLFQPQPNEMDIRASEHWISDNMVKSKTEL 455
            :|||.|.|||||||.||||:|:|||||||||||:|.|||..|.  |.|::|||:||| :|.|.:|
 Frog   428 DFWKARDEQETPEDHEEWAEHDDYMTQLLLKFGEKGLFQQAPE--DNRSNEHWMSDN-IKGKNDL 489

Human   456 KQN--NQSLASKKYQSDMYWAQSQDGLGDSAYGSHPGPASSRRLQELELDHGASGYNHDETQWYE 518
            ::|  |||||||||||||||||||||||||||||||||||||:||||::|||||||.|::..||:
 Frog   490 QRNSRNQSLASKKYQSDMYWAQSQDGLGDSAYGSHPGPASSRKLQELDMDHGASGYMHEKMPWYK 554

Human   519 DSLECLSD-LKPE-QSVRDSMDSLALSNITGASVDGENKPRPSLYSLQNFEEMETEDCEKMSNMG 581
            .||||||| |||: :::.|||||||||||||||||.||||||||:|.|||:::.|.|||||||||
 Frog   555 RSLECLSDNLKPQNENICDSMDSLALSNITGASVDRENKPRPSLFSYQNFQDLNTRDCEKMSNMG 619

Human   582 TLNSSMLHRSAESLKSLSSELCPEKILPEEKPVHLPVLRRSKSQSRPQQVKFSDDVIDNGNY-DI 645
            |||||||:||.||||||:||:|.||..|||||:|...|||||||:|| ||||||||||||:. .|
 Frog   620 TLNSSMLNRSTESLKSLNSEICQEKPPPEEKPMHTSALRRSKSQTRP-QVKFSDDVIDNGDCGSI 683

Human   646 EIRQPPMSERTRRRVYNFEERGSRSHHHRRRRSRKSRSDNALNLVTERKYSPKDR-LRLYTPDNY 709
            :|||||||||:||||||||||..|.||||||:||||||:|||:|.||.|.|.::| .|.||.::|
 Frog   684 DIRQPPMSERSRRRVYNFEERSQRPHHHRRRKSRKSRSENALHLATESKPSGRERNPRFYTAEDY 748

Human   710 EKFIQNKSAREIQAYIQNADLYGQYAHATSDYGLQNPGMNRFLGLYGEDDDSWCSS-SSSSSDSE 773
            ||...|:||.|:|||||||||:|||.:|.|::||.:..:::||||||||:|||||: ||||||||
 Frog   749 EKLFHNRSAHEVQAYIQNADLFGQYPNAASNFGLPSQVVDKFLGLYGEDEDSWCSTCSSSSSDSE 813

Human   774 EEGYFLGQPIPQPRPQRFAYYTDDLSSPPSALPTPQFGQRTTKSKKKKGHKGKNCIIS 831
            |||||||||||:|.|||:.|::|||.||.:||.:.||.||||||||||||||||||||
 Frog   814 EEGYFLGQPIPKPLPQRYQYFSDDLCSPTNALSSSQFSQRTTKSKKKKGHKGKNCIIS 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRICKLE1NP_694571.2 PET_Prickle 22..118 CDD:193602 86/95 (91%)
LIM1_Prickle_1 126..184 CDD:188867 51/57 (89%)
LIM2_Prickle 189..244 CDD:188802 51/54 (94%)
LIM3_Prickle 249..307 CDD:188804 51/57 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..342 27/28 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 663..688 19/24 (79%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 763..831 53/68 (78%)
prickle1XP_012814522.1 PET_Prickle 60..156 CDD:193602 86/95 (91%)
LIM1_Prickle 164..222 CDD:188799 51/57 (89%)
LIM2_Prickle 227..282 CDD:188802 51/54 (94%)
LIM3_Prickle 287..345 CDD:188804 51/57 (89%)

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