DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc6a12 and GlyT

DIOPT Version :9

Sequence 1:NP_001368835.1 Gene:Slc6a12 / 14411 MGIID:95628 Length:628 Species:Mus musculus
Sequence 2:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster


Alignment Length:587 Identity:245/587 - (41%)
Similarity:358/587 - (60%) Gaps:51/587 - (8%)


- Green bases have known domain annotations that are detailed below.


Mouse    49 DRGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQY 113
            :||.||.:.:|:||:.|..:|||||||||||||.||||||.||:.|.....|:|:.|:|::.|||
  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120

Mouse   114 SSQGSVTAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTCTNSWNTE 178
            ::.|.|..:|:.|||.:|:|...:::.:.:.:||.:|:||.:||:|:||...|||..|..:|:|:
  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185

Mouse   179 HCVDFLNHSSARGVSSS------ENFTS-----------------PVMEFWERRVLGITSGIHDL 220
            :|..:.........:.:      .|.||                 |..|::...|||::.||.:.
  Fly   186 YCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEET 250

Mouse   221 GSLRWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIILLIRGVTLPGAYQGIVFYL 285
            ||::..||.||.|||.|.:.|:.|||:|:||||||||.|||::|:||.:||||||||..||:|||
  Fly   251 GSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYL 315

Mouse   286 KPDLLRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFV 350
            .||..:|.:.|||.||..||||:.:...|.|..|.||||:.||||:||:.:.|.|.||||.||.|
  Fly   316 TPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLV 380

Mouse   351 VFSILGFMSQEQGIPISEVAESGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLLFLGLDSQFVCME 415
            :|||:||::.|..:.:.:|.:.|.|||||.:|:.||.:|:|.:|:.|||:|||.|||||||..||
  Fly   381 IFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALME 445

Mouse   416 CLVTASMDMFPQQLRKSGRRELLILAISVLCYLMGLLLVTEGGMYIFQLFDYYASSGICLLFLSL 480
            .:.||.:|.|| .||:  .:..::|::::..|:.||...|..|||..||.|.||::...|| :::
  Fly   446 TVTTAILDRFP-NLRQ--YKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAI 506

Mouse   481 FEVICIGWVYGADRFYDNVEDMIGYRPW---PLVKISWLFLTPGLCLATFFFSLSKYTPLKYNNV 542
            .|.|.|.|:||:.||.::::.|||.|.|   ....|.|.::||...|...||:..:|.|.||.: 
  Fly   507 SECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGH- 570

Mouse   543 YMYPSWGYSIGW-----------LLAFSSMACVPLFIIITFLKTQGSFKKRLRRLITPDPSLPQP 596
            |:||.|..::||           |:||..:...|:.:         ||:.|::.|:.|.......
  Fly   571 YVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSL---------SFRDRIKHLLQPTAEWGPA 626

Mouse   597 GR 598
            ||
  Fly   627 GR 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a12NP_001368835.1 SLC5-6-like_sbd 49..589 CDD:382020 242/576 (42%)
GlyTNP_611836.2 SNF 57..603 CDD:249680 237/550 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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