Protein Alignment Gabre and GluClalpha

DIOPT Version :9

• Sequence 1: NP_059065.2
• Gene: Gabre / 14404
• MGIID: 1330235
• Length: 916
• Species: Mus musculus
• Sequence 2: NP_001287408.1
• Gene: GluClalpha / 42350
• FlyBaseID: FBgn0024963
• Length: 463
• Species: Drosophila melanogaster
• Alignment Length: 481
• Identity: 137/481 - (28%)
• Similarity: 224/481 - (46%)
• Gaps: 111/481 - (23%)

Mouse   481 RASRILNTIL--SNYDHKLRP-GIG--EKPTVVTVEVIVNSLGPISTPDMEYSIDIIFHQTWYDE 540
            :..::|:.||  ..||.::|| ||.  :.|.||.|.:.|.|:..|....||||:.:.|.:.|.||
  Fly    32 KEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWTDE 96

Mouse   541 RLRYNDTFETLILHGNV-------VSQLWIPDTFFRNSKRTQEYDITIPNQMALIHKDGKVLYSV 598
            ||:::|      :.|.:       .:::|:||.||.|.|....::|.:||....|..:|.||||:
  Fly    97 RLKFDD------IQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSI 155

Mouse   599 RMTIDARCSLHMLNFPMDSHSCPLSFSSFSYDDSEMIYKW-ENFKLEINAKN----TWKLLEFDF 658
            |:::...|.:::..:|:|...|.|..:|:.:..:::::.| |...::: .||    .:.|.:|..
  Fly   156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQV-VKNLHLPRFTLEKFLT 219

Mouse   659 TGVNNKTEIISTPFGDFMVMTFFFNVSRRFGFIVFQNYVPSSVTTMLSWVSFWIKIEAAAARASV 723
            ...|:||..     |::..:.......|.|.:.:.|.|:|..:..::||||||:...|..||.|:
  Fly   220 DYCNSKTNT-----GEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSL 279

Mouse   724 GVSSVLTMATLGTLSCKNFPRVSYLTALDFYIAICFVLCFCTLLEFAVLNFLTYN---------- 778
            ||:::|||||..:....:.|.|||..|:|.:..:|....|..|||||::|:.:.:
  Fly   280 GVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKE 344

Mouse   779 NIKR------QASLKVYQ--LPTNSRANARTRARARTRARAR--ARARQQQEVFV---------- 823
            |:|:      ||||....  |.|:|.|         |.|.|.  ||...||:..|
  Fly   345 NMKKKRRDLEQASLDAASDLLDTDSNA---------TFAMASQFARGGGQQKPLVRHPGDPLALE 400

Mouse   824 ----CEIVTYEENAEEGYQWSPRSRRPQCPWRRCGRSYVCFRVLRKYFCMAPGCEGGSWQRGRIC 884
                ||:          :..:|  :||.|          |...|.|:    |       .|.:
  Fly   401 KRLQCEV----------HMQAP--KRPNC----------CKTWLSKF----P-------TRSK-- 430

Mouse   885 IHVYRLDNYSRVLFPITFFFFNVLYW 910
                |:|..||:.||:.|..||::||
  Fly   431 ----RIDVISRITFPLVFALFNLVYW 452

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gabre	NP_059065.2	Neur_chan_LBD	482..687	CDD:280998	61/221 (28%)
		LIC	484..912	CDD:273305	137/478 (29%)
		Neur_chan_memb	696..910	CDD:280999	71/247 (29%)
GluClalpha	NP_001287408.1	LIC	3..455	CDD:273305	137/481 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000