Sequence 1: | NP_001033790.1 | Gene: | Gabrb3 / 14402 | MGIID: | 95621 | Length: | 473 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261986.1 | Gene: | SecCl / 39949 | FlyBaseID: | FBgn0036727 | Length: | 509 | Species: | Drosophila melanogaster |
Alignment Length: | 528 | Identity: | 137/528 - (25%) |
---|---|---|---|
Similarity: | 239/528 - (45%) | Gaps: | 98/528 - (18%) |
- Green bases have known domain annotations that are detailed below.
Mouse 8 LLLPIWLSWTLGTRGSEPSSVNDPGNMSFVKETVDKL--LKGYDIRLRP---DFGGP--PVCVGM 65
Mouse 66 NIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPL--NLTLDNRVADQLWVPDTYFLNDKK 128
Mouse 129 SFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYW 193
Mouse 194 R-----GGDKAVTGVERIELPQFSIVEHRLVS---------------RNVVFATGAYPRLSLSFR 238
Mouse 239 LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYV 303
Mouse 304 KAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKSEINRVDAHGNIL 368
Mouse 369 LAPMDVHNEMNEVAGSVGD--TRNSAISFDNSGIQYRKQSM------PKEGHGRYMG-DRSIPHK 424
Mouse 425 KT------------------HLRRRSSQLKIKIPDLTDVNA------IDRWSRIVFPFTFSLFNL 465
Mouse 466 VYWLY-YV 472 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gabrb3 | NP_001033790.1 | LIC | 4..471 | CDD:273305 | 135/525 (26%) |
SecCl | NP_001261986.1 | LIC | 43..505 | CDD:273305 | 126/496 (25%) |
Neur_chan_LBD | 44..267 | CDD:280998 | 56/234 (24%) | ||
Neur_chan_memb | 275..503 | CDD:280999 | 65/249 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3673 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.760 |