Sequence 1: | NP_001334243.1 | Gene: | Gabrb2 / 14401 | MGIID: | 95620 | Length: | 512 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
Alignment Length: | 590 | Identity: | 193/590 - (32%) |
---|---|---|---|
Similarity: | 290/590 - (49%) | Gaps: | 139/590 - (23%) |
- Green bases have known domain annotations that are detailed below.
Mouse 20 AAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLT 84
Mouse 85 MYFQQAWRDKRLSYNVIP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGT 147
Mouse 148 VLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Mouse 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVAL 277
Mouse 278 GITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF--FGRGPQR--- 337
Mouse 338 ------QKK-----AAEKAANANNE---------------------------------------- 351
Mouse 352 ------------KMRLDVNKMFYKDIKQN-GTQYRSLWDPTGDLSPTRRTTNYDFSLYTMDPHEN 403
Mouse 404 ILLSTLE--IKNEMATSEA------------------------VMGLGDPRSTMLAYDASSIQYR 442
Mouse 443 KAGLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYW 507
Mouse 508 LYYVN 512 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gabrb2 | NP_001334243.1 | LIC | 9..510 | CDD:273305 | 192/586 (33%) |
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 71/182 (39%) |
Neur_chan_memb | 274..588 | CDD:397193 | 100/352 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101786 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.720 |