DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gabpa and Ets97D

DIOPT Version :10

Sequence 1:XP_006522968.1 Gene:Gabpa / 14390 MGIID:95610 Length:456 Species:Mus musculus
Sequence 2:NP_001263000.1 Gene:Ets97D / 43236 FlyBaseID:FBgn0004510 Length:484 Species:Drosophila melanogaster


Alignment Length:457 Identity:174/457 - (38%)
Similarity:251/457 - (54%) Gaps:58/457 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 AEELI-EIEIDGTEK----AECTEESI-VEQTYTPAECVSQAIDINEPIGNLKKLLEPRLQCSLD 64
            ::||| .:.:.|..:    :|..|:|| ||....|.:.:...:||.||:..||.|:|.::...|:
  Fly     8 SDELIRRLSVGGALEEVIASEMFEDSIDVETEAEPDDIIIVHMDIREPLSMLKSLVEQKIGVCLN 72

Mouse    65 AHEICLQDIQ-LDPDRSLFDQGVKTDGTVQLSVQVISYQGMEPKLNILEIVKTAETV------EV 122
            .:...|||.| |:..::|.||.||.:|.||::||:   |.:..::||.:::|..|..      ||
  Fly    73 YYTFWLQDAQELESHKNLVDQCVKGEGLVQINVQI---QTIRKRINIADVLKPTEAALAALAEEV 134

Mouse   123 VIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSE-----QVTRWAAALEGYRKEQERLGI 182
            |.........::.....|:.:.|.....|.....:|:.|     .|..|....: :::||.||.|
  Fly   135 VGQLSPPETASQKSSSSESPIKTPLKRMHKEDSEEESVEGKDVKPVLNWVLDSK-FKREQIRLKI 198

Mouse   183 PYDPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEILWSHLE 245
            |.....|:...|.:|:.|.:|:|.:..|:::...::|:|||::..|:|.|::||  |.|.|:||:
  Fly   199 PEAANEWTHAHVTYWLEWAVKQFELVGINMSDWQMNGQELCAMTHEEFNQKLPRDPGNIFWTHLQ 263

Mouse   246 LLRKYVLAS------QEQQMNEIVTIDQPVQIIPASVPPATPTTIKVINSSAKAAKVQRSPRISG 304
            ||::....|      :||:        :|.|  |..:...:.:|    ||....:..||..|.|.
  Fly   264 LLKECNFVSVVHKRAEEQR--------KPKQ--PRIMSANSIST----NSGGSLSLEQRIMRKSY 314

Mouse   305 EDRSS------------PGNRTDL--GNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQP 355
            :...|            |.|.|.:  |||||:||||||||:|||.:..|.|.|||.||||||..|
  Fly   315 QSVKSSDSVESTTSSMNPSNYTTIGSGNNGQVQLWQFLLEILTDCEHTDVIEWVGTEGEFKLTDP 379

Mouse   356 ELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLV 420
            :.||:.||::||||.|||||||||||||||||||.||.||||.|||.||||.||||.|.||:.||
  Fly   380 DRVARLWGEKKNKPAMNYEKLSRALRYYYDGDMISKVSGKRFAYKFDCDLKLLIGYDANELSTLV 444

Mouse   421 IE 422
            .|
  Fly   445 SE 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GabpaXP_006522968.1 GABP-alpha 40..119 CDD:463311 28/79 (35%)
SAM_PNT-GABP-alpha 168..254 CDD:176084 29/87 (33%)
ETS 321..405 CDD:197710 61/83 (73%)
Ets97DNP_001263000.1 GABP-alpha 48..123 CDD:463311 28/77 (36%)
SAM_PNT-GABP-alpha 184..272 CDD:176084 29/88 (33%)
ETS 345..429 CDD:197710 61/83 (73%)

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