Sequence 1: | XP_006522968.1 | Gene: | Gabpa / 14390 | MGIID: | 95610 | Length: | 456 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524461.2 | Gene: | pnt / 42757 | FlyBaseID: | FBgn0003118 | Length: | 718 | Species: | Drosophila melanogaster |
Alignment Length: | 600 | Identity: | 127/600 - (21%) |
---|---|---|---|
Similarity: | 175/600 - (29%) | Gaps: | 324/600 - (54%) |
- Green bases have known domain annotations that are detailed below.
Mouse 137 LVEEAQVI----TLDGTKHITTISD----ETSEQVTR----------------WAAALEGYRKEQ 177
Mouse 178 ERLGIPYDPIHWSTDQVLHWVVWVMKEFSMTDIDLTTL-NISGRELCSLNQEDFFQRVP--RGEI 239
Mouse 240 LWSHLELLRK---------------------YVLASQEQ---------------QMNEIVTIDQP 268
Mouse 269 VQI---------------------------IPASVPP-----ATPTTIKVINSSAKAAK------ 295
Mouse 296 ----VQRS--------------------------------------------------------- 299
Mouse 300 -------------------------------------------------------------PRIS 303
Mouse 304 GED----RSSPGNRT------DLGN---------------------------------------- 318
Mouse 319 -----------------------------------------------NGQIQLWQFLLELLTDKD 336
Mouse 337 ARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKF 401
Mouse 402 VCDLKTLIGYSAAEL 416 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gabpa | XP_006522968.1 | GABP-alpha | 40..119 | CDD:371630 | |
SAM_PNT-GABP-alpha | 168..254 | CDD:176084 | 29/109 (27%) | ||
ETS | 321..405 | CDD:197710 | 56/83 (67%) | ||
pnt | NP_524461.2 | SAM_PNT-ETS-1,2 | 179..250 | CDD:188879 | 24/70 (34%) |
ETS | 609..693 | CDD:197710 | 56/83 (67%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3806 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D243757at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |