DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fzd5 and smo

DIOPT Version :9

Sequence 1:NP_001036124.1 Gene:Fzd5 / 14367 MGIID:108571 Length:585 Species:Mus musculus
Sequence 2:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster


Alignment Length:545 Identity:143/545 - (26%)
Similarity:230/545 - (42%) Gaps:120/545 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse    41 CRG--IGYNLTHMPNQFNHDTQDEAGLEVHQFWPLVEI-HCSPDLRFFLCSMYTPIC-------- 94
            |.|  :.|.|:.:.....| |:.|...:::.::.|..: .|...::.|||:::.|.|        
  Fly   100 CFGSKLPYELSSLDLTDFH-TEKELNDKLNDYYALKHVPKCWAAIQPFLCAVFKPKCEKINGEDM 163

Mouse    95 --LPDYHK---PLPPCRSVCERAKAGCSPLMRQYGFAWPERMSCDRLPVLGGDAEVLCMDYNRSE 154
              ||.|..   .:.|||.:                                         ||   
  Fly   164 VYLPSYEMCRITMEPCRIL-----------------------------------------YN--- 184

Mouse   155 ATTASPK-------SFPAKPTLPGPPGAPSSG-GECPSGGPSVCTCREPFVPILKESHPLYNKVR 211
             ||..||       .||.|.| .|..|...:| |:|.|          |.|| ...|...|..:.
  Fly   185 -TTFFPKFLRCNETLFPTKCT-NGARGMKFNGTGQCLS----------PLVP-TDTSASYYPGIE 236

Mouse   212 TGQVPNCAVPCYQPSFSPDERTFATFWIGLWSVLCFISTSTTVATFLIDMERF-RYPERPIIFLS 275
                 .|.|.|..|.::.||.......||....:|.:|....|:||.||.:.. :||...:.:::
  Fly   237 -----GCGVRCKDPLYTDDEHRQIHKLIGWAGSICLLSNLFVVSTFFIDWKNANKYPAVIVFYIN 296

Mouse   276 ACYLCVSLGFLVRLVVG-HASVACSREHSHIHYE-TTGPAL-CTVVFLLVYFFGMASSIWWVILS 337
            .|:|...:|:|::...| ...:.|.::.:..|.| |.|..| |.|:|:|||:|..|..:|:|.|:
  Fly   297 LCFLIACVGWLLQFTSGSREDIVCRKDGTLRHSEPTAGENLSCIVIFVLVYYFLTAGMVWFVFLT 361

Mouse   338 LTWFLAAGMKWGNEAIAGYAQYFHLAAWLIPSVKSITALALSSVDGDPVAGICYVGNQNLNSLRG 402
            ..|...| |....:.|.....||||.||.:|.|.:||.:|.|.|||:.:.|||:||..|.:...|
  Fly   362 YAWHWRA-MGHVQDRIDKKGSYFHLVAWSLPLVLTITTMAFSEVDGNSIVGICFVGYINHSMRAG 425

Mouse   403 FVLGPLVLYLLVGTLFLLAGFVSLFRIRSVIK--QGGTKTDKLEKLMIRIGIFTLLYTVPASIVV 465
            .:||||...:|:|..|:..|.|.||.::....  :..:.::|:..:::|:|:..||..|...:.:
  Fly   426 LLLGPLCGVILIGGYFITRGMVMLFGLKHFANDIKSTSASNKIHLIIMRMGVCALLTLVFILVAI 490

Mouse   466 ACYLYEQHYRESW----------------EAALTCACPGPDAGQPRAKPEYWVLMLKYFMCLV-V 513
            ||::.|..:.:.|                |...:|....        :|...||.| :.:||. .
  Fly   491 ACHVTEFRHADEWAQSFRQFIICKISSVFEEKSSCRIEN--------RPSVGVLQL-HLLCLFSS 546

Mouse   514 GITSGVWIWSGKTLESWRRFTSRCC 538
            ||....|.|:..::|:|:|:..:.|
  Fly   547 GIVMSTWCWTPSSIETWKRYIRKKC 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fzd5NP_001036124.1 CRD_FZ5 29..156 CDD:143569 22/130 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..182 12/33 (36%)
7tm_GPCRs 225..535 CDD:333717 98/332 (30%)
TM helix 1 235..259 CDD:320095 7/23 (30%)
TM helix 2 268..289 CDD:320095 4/20 (20%)
TM helix 3 316..338 CDD:320095 10/21 (48%)
TM helix 4 359..375 CDD:320095 9/15 (60%)
TM helix 5 397..420 CDD:320095 8/22 (36%)
TM helix 6 448..473 CDD:320095 8/24 (33%)
TM helix 7 496..521 CDD:320095 8/25 (32%)
PDZ-binding. /evidence=ECO:0000250 582..584
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 36/177 (20%)
Frizzled 246..568 CDD:279827 97/331 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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