DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fzd4 and fz2

DIOPT Version :9

Sequence 1:NP_032081.3 Gene:Fzd4 / 14366 MGIID:108520 Length:537 Species:Mus musculus
Sequence 2:NP_001262037.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:806 Species:Drosophila melanogaster


Alignment Length:609 Identity:234/609 - (38%)
Similarity:319/609 - (52%) Gaps:133/609 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 GGVGLRLGLLLQFLLLLRPTLGFG-----DEEERRCDPIRIAMCQNLGYNVTKMPNLVGHELQTD 74
            ||.||...          |..|:|     .:...||:.|.|.||:.:|||:|..||.:.||.|.:
  Fly    39 GGHGLDAS----------PAPGYGVPVIPKDPNLRCEEITIPMCRGIGYNMTSFPNEMNHETQDE 93

Mouse    75 AELQLTTFTPLIQYGCSSQLQFFLCSVYVPMCTEKINIPIGPCGGMCLSVKRRCEPVLREFGFAW 139
            |.|::..|.||::..||..|:|||||:|.|:|.|..:.|:..|..:|...:..|.|:::::.|.|
  Fly    94 AGLEVHQFWPLVEIKCSPDLKFFLCSMYTPICLEDYHKPLPVCRSVCERARSGCAPIMQQYSFEW 158

Mouse   140 PDTLNCSKFPPQNDHNHMCMEGPGDEEV------------------------------------- 167
            |:.:.|...|...|.:::|||.|...|.                                     
  Fly   159 PERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSSGGSGGSGSGSGSGGKRKQGGSGSGGSGAGGS 223

Mouse   168 -------------------PLPHKTPIQPGEECHSVGSNSDQYIWVKRSL--------------- 198
                               |...|.   .|:|| |....|......|..|               
  Fly   224 SGSTSTKPCRGRNSKNCQNPQGEKA---SGKEC-SCSCRSPLIFLGKEQLLQQQSQMPMMHHPHH 284

Mouse   199 --------------NCVLKCGYDAGLYSRSAKEFTDIWMAVWASLCFISTTFTVLTFLIDSSRFS 249
                          ||.:.|  ....:|...|:|..:|:|:|:.|||.||..|:.||:||:.||.
  Fly   285 WYMNLTVQRIAGVPNCGIPC--KGPFFSNDEKDFAGLWIALWSGLCFCSTLMTLTTFIIDTERFK 347

Mouse   250 YPERPIIFLSMCYNIYSIAYIVRLTVGRERISCDFEEAAEPVLIQEGLKNTG---CAIIFLLMYF 311
            ||||||:|||.||.:.::.|:.|..:..|.|:||      .:|::|  .:||   |.::|||.||
  Fly   348 YPERPIVFLSACYFMVAVGYLSRNFLQNEEIACD------GLLLRE--SSTGPHSCTLVFLLTYF 404

Mouse   312 FGMASSIWWVILTLTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKTIVILIMRLVDADELTGL 376
            ||||||||||||:.|||||||||||:|||..||.|||:|||.||.|:::.:|::..||.|.:.|:
  Fly   405 FGMASSIWWVILSFTWFLAAGLKWGNEAITKHSQYFHLAAWLIPTVQSVAVLLLSAVDGDPILGI 469

Mouse   377 CYVGNQNLDALTGFVVAPLFTYLVIGTLFIAAGLVALFKIRSNLQKD-----GTKTDKLERLMVK 436
            |||||.|.|.|..||:||||.||||||.|:.||.|:||:|||.:::.     |.|.||||:||::
  Fly   470 CYVGNLNPDHLKTFVLAPLFVYLVIGTTFLMAGFVSLFRIRSVIKQQGGVGAGVKADKLEKLMIR 534

Mouse   437 IGVFSVLYTVPATCVIACYFYE---ISNW--------ALFRYSADDSNMAVEMLKIFMSLLVGIT 490
            ||:||||||||||.||.||.||   ..:|        |..:........:|.|||.||:|.||||
  Fly   535 IGIFSVLYTVPATIVIGCYLYEAAYFEDWIKALACPCAQVKGPGKKPLYSVLMLKYFMALAVGIT 599

Mouse   491 SGMWIWSAKTLHTWQKCSNRLVNS 514
            ||:||||.|||.:|::...||:.:
  Fly   600 SGVWIWSGKTLESWRRFWRRLLGA 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fzd4NP_032081.3 CRD_FZ4 42..167 CDD:143557 47/124 (38%)
Frizzled 210..509 CDD:279827 165/317 (52%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 499..504 3/4 (75%)
PDZ-binding 535..537
fz2NP_001262037.1 CRD_FZ5_like 63..182 CDD:143565 46/118 (39%)
Frizzled 308..618 CDD:279827 165/317 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D237456at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.