DRSC/TRiP Functional Genomics Resources

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Protein Alignment FRMPD2 and inaD

DIOPT Version :9

Sequence 1:NP_001018081.4 Gene:FRMPD2 / 143162 HGNCID:28572 Length:1309 Species:Homo sapiens
Sequence 2:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster


Alignment Length:643 Identity:128/643 - (19%)
Similarity:223/643 - (34%) Gaps:211/643 - (32%)


- Green bases have known domain annotations that are detailed below.


Human   597 STYQKKFTITSSVTGKKHTFVTDSAKTSK-----------YLLDLCSAQHGFNAQMGSGQPSHVL 650
            |..::..|.|:|:..|...:..:..:.::           |.:|..||.   |.::...:.....
  Fly   175 SMQKRNTTFTASMRQKHSNYADEDDEDTRDMTGRIRTEAGYEIDRASAG---NCKLNKQEKDRDK 236

Human   651 FDHDKF-VQMANLSPAH------------QARSKPLIWI-------QRLSCSENELFVSRL--QG 693
            ...|:| ..||.::..:            :..||||...       |:::|     ||:.:  .|
  Fly   237 EQEDEFGYTMAKINKRYNMMKDLRRIEVQRDASKPLGLALAGHKDRQKMAC-----FVAGVDPNG 296

Human   694 AAGGL---------------------LSTSMDNFNVDGSK--------EAGAEGIGRSPCTGREQ 729
            |.|.:                     |:.|....||||.|        :...||:          
  Fly   297 ALGSVDIKPGDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRRKPNDEGM---------- 351

Human   730 LKSACVIQKPMTWDSLSGPPVQSMHAGSKNNRRKSFIAEPGREIVRVTLKRDPHRGF-GFVINEG 793
                ||            .|::.....|...:   ||.:...:...|.::::   || |.::..|
  Fly   352 ----CV------------KPIKKFPTASDETK---FIFDQFPKARTVQVRKE---GFLGIMVIYG 394

Human   794 EYSGQADPGIFISSIIPGGPAEKAKTIKPGGQILALNH-ISLEGFTFNMAVRMIQNSPDNIELI- 856
            ::: :...|||||.:..|..||.| .:|.|..:||:|. ::||. .::.|..:::.:...:.:| 
  Fly   395 KHA-EVGSGIFISDLREGSNAELA-GVKVGDMLLAVNQDVTLES-NYDDATGLLKRAEGVVTMIL 456

Human   857 --ISQSKGVGGNNPDEEKNSTANSGVSSTDILSFGYQGSLLSHTQDQDRNTEELDMAGVQSLVPR 919
              :...:.:......|||.                         :::.:..||...         
  Fly   457 LTLKSEEAIKAEKAAEEKK-------------------------KEEAKKEEEKPQ--------- 487

Human   920 LRHQLSFLPLKGAGSSCPPSPPEISAGEIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIVP 984
                             .|:..||...:...:||..|...:|..|.||.|..|..|.: :..:.|
  Fly   488 -----------------EPATAEIKPNKKILIELKVEKKPMGVIVCGGKNNHVTTGCV-ITHVYP 534

Human   985 GGPAAKEGQILQGDRLLQVDGVILCGLTHKQAVQCLTGPGQVARLVLERRVPRSTQQCPSANDSM 1049
            .|..|.:.::...|.:..::|..:    |         .|.:..|.:.:....:.::        
  Fly   535 EGQVAADKRLKIFDHICDINGTPI----H---------VGSMTTLKVHQLFHTTYEK-------- 578

Human  1050 GDERTAVSLVTALPGRPSSCVSVTDGP---KFEVKL-KKNANGLGFSFVQMEKESCSHLKSDLVR 1110
                 ||:|.          |...|.|   ||.|.| ||....||.| :...:..|:        
  Fly   579 -----AVTLT----------VFRADPPELEKFNVDLMKKAGKELGLS-LSPNEIGCT-------- 619

Human  1111 IKRLFPGQPAEENGAIAAGDIILAVNGRSTEGLIFQEVLHLLRGAPQEVTLLLCRPPP 1168
            |..|..||..|.:..:..||||...||.:.|||.||....|.:||..:|::.:.||.|
  Fly   620 IADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKP 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FRMPD2NP_001018081.4 KIND 15..197 CDD:214801
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..249
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..302
B41 346..550 CDD:214604
FERM_C_PTPH13 546..647 CDD:270008 10/60 (17%)
PDZ_signaling 773..857 CDD:238492 23/88 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 859..880 3/20 (15%)
PDZ 947..1034 CDD:214570 18/86 (21%)
PDZ 1078..1167 CDD:214570 30/89 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1204..1228
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492
PDZ_signaling 259..340 CDD:238492 18/85 (21%)
PDZ_signaling 377..457 CDD:238492 23/85 (27%)
PDZ_signaling 500..584 CDD:238492 21/120 (18%)
PDZ_signaling 597..672 CDD:238492 28/83 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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