DRSC/TRiP Functional Genomics Resources

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Protein Alignment Brd2 and tbrd-3

DIOPT Version :9

Sequence 1:NP_001191902.1 Gene:Brd2 / 14312 MGIID:99495 Length:798 Species:Mus musculus
Sequence 2:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster


Alignment Length:378 Identity:101/378 - (26%)
Similarity:145/378 - (38%) Gaps:124/378 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse   346 SEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDA 410
            |.::..|..|:|.|.|..:...||.||:|:|...|||||||:|::.|||||||:.::....|..|
  Fly    11 SPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSA 75

Mouse   411 QEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTALPPGLTKS 475
            .:||.|:||:|.|.|.|..|||....||::||.:||..|::                :...:..|
  Fly    76 ADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQ----------------VQLYICSS 124

Mouse   476 SSESSSEESSSESSSEEEEEEEEDEDEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPI 540
            .|:..:||   ||||:|.:....:::...||.|.|                       .:...|.
  Fly   125 GSKVRAEE---ESSSDESDSSSPEDEVNGSEVSPS-----------------------IMGAPPS 163

Mouse   541 SKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAPRPPQPKKSKKAGGGGSNATTLSHPGFGT 605
            ..|                                                    ||...|    
  Fly   164 CTP----------------------------------------------------TTECTP---- 172

Mouse   606 SGGSSNKLPKKSQKTAPPVLPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAR 670
                      ....|.|..|.|   ||::|   |.:.:|...|...|.:|.||.|..|:|.||..
  Fly   173 ----------TPDWTPPATLET---SEQQE---PFTTEEDLDLHAKIQQLDGEVLLHVIHFIQRM 221

Mouse   671 EPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIRKPVGKTK 723
            |.:  :...:|:|.|...||..|.|.:..|:.|       |.:| .|.|.:||
  Fly   222 EGA--EYCNKELEFDICKLKVHTKRGIRDYLAS-------KGFT-GKRVARTK 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brd2NP_001191902.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..72
Bromo_Brdt_I_like 73..179 CDD:99929
PHA03247 <215..332 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..348 1/1 (100%)
Bromo_Brdt_II_like 348..449 CDD:99930 46/100 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 454..645 26/190 (14%)
Nuclear localization signal. /evidence=ECO:0000255 553..557 0/3 (0%)
BET 639..701 CDD:407211 20/61 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 736..798
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 46/100 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.910

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