DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Flt1 and htl

DIOPT Version :9

Sequence 1:NP_034358.2 Gene:Flt1 / 14254 MGIID:95558 Length:1333 Species:Mus musculus
Sequence 2:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster


Alignment Length:843 Identity:236/843 - (27%)
Similarity:342/843 - (40%) Gaps:282/843 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse   421 ATLIVNVKPQIYEKSVSSLPSPPLYPLGSRQVLTCTVYGIPRPTITWLWHPCHHNHSKERYDFCT 485
            |.|.|||..:.|.::...:......|.||...|.|...|.|.|.|||     :.|.:        
  Fly    91 ADLPVNVSSKPYWRNPKKMSFLQTRPSGSLLTLNCHALGNPEPNITW-----YRNGT-------- 142

Mouse   486 ENEESFILDPSSNLGNRIESISQRMTVIEGTNKTVSTLVVADSQTPGIYSCRAFNKIGTVERNIK 550
                   :|.:...|:...:   |.|:      |:..||..|.   |.|:|:..|.:|.:..:.:
  Fly   143 -------VDWTRGYGSLKRN---RWTL------TMEDLVPGDC---GNYTCKVCNSLGCIRHDTQ 188

Mouse   551 FYVTDVPNGFHVSLEKMPAEGEDLKLSCVVN-------KFLYRDIT----WI------LLRTVNN 598
            ..|:|     .|:.:.:...| .|.|:.|||       |:| .|:|    ||      :....||
  Fly   189 VIVSD-----RVNHKPILMTG-PLNLTLVVNSTGSMHCKYL-SDLTSKKAWIFVPCHGMTNCSNN 246

Mouse   599 RTMHHSISKQKMATTQDYSITLNLVIKNVSLEDSGTYACRARNIYTGEDILRKTEVLVRDSEAPH 663
            |::        :|..:|     .|...||.:|..|.|.|...|                      
  Fly   247 RSI--------IAEDKD-----QLDFVNVRMEQEGWYTCVESN---------------------- 276

Mouse   664 LLQNLSDYEVSISGSTTLDCQARGVPAPQITWFKNNHKIQQEPGIILGPGNSTLFIERVTEEDEG 728
                                                         .||..|||.::..|    ..
  Fly   277 ---------------------------------------------SLGQSNSTAYLRVV----RS 292

Mouse   729 VYRCRATNQKGAVESAA--YLTVQGTSDKSNLELITLTCTCVAATLFWLLLTLF----IRKLKR- 786
            ::...|....|::.|.:  |:.|.|                  ..:|..:.|||    |||:|. 
  Fly   293 LHVLEAGVASGSLHSTSFVYIFVFG------------------GLIFIFMTTLFVFYAIRKMKHE 339

Mouse   787 ---------------------------SSSEVKTDYLSIIM-----------DPDEVPLDEQCER 813
                                       ||..:.|..:.::.           ..:..|.:|.  .
  Fly   340 KVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEY--E 402

Mouse   814 LPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMT 878
            .|.| |.||..|..|.||.:||.||||:||.|..       ....|||||:|||.|..:..:|:.
  Fly   403 FPLD-SNWELPRSHLVLGATLGEGAFGRVVMAEV-------NNAIVAVKMVKEGHTDDDIASLVR 459

Mouse   879 ELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFCLNKDAALHMELKK 943
            |::::..||.|:|::||||.|: |.|||.|||||..:|||.::|...|                 
  Fly   460 EMEVMKIIGRHINIINLLGCCS-QNGPLYVIVEYAPHGNLKDFLYKNR----------------- 506

Mouse   944 ESLEPGLEQGQKPRLDSVSSSSVTSSSFPEDRSVSDVEGDEDYSEISKQP----LTMEDLISYSF 1004
                                      .|..|:       |.|.|:....|    :|.:|||.::.
  Fly   507 --------------------------PFGRDQ-------DRDSSQPPPSPPAHVITEKDLIKFAH 538

Mouse  1005 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRRG-DTRLPLKWMAP 1068
            |:||||::|:||:||||||||||:|:|::.|:||.|||||||| ::.||.|:. :.|||:|||||
  Fly   539 QIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDI-QSTDYYRKNTNGRLPIKWMAP 602

Mouse  1069 ESIFDKVYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLKEGMRMRTPEYATPEIYQIM 1133
            ||:.:|.|.:||||||||:|||||.:.|..|||.:...|:..:.|..|.||..|...:..||.:|
  Fly   603 ESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILM 667

Mouse  1134 LDCWHKDPKERPRFAELVEKLGDLLQANVQQDGKDYIPLNAILTRNSGFTYSTPTFSEDLFKD 1196
            ..|||.:..:||.|.|:||.:..|||..     :||:.::..       ...||..:.|..:|
  Fly   668 RQCWHFNADDRPPFTEIVEYMDKLLQTK-----EDYLDVDIA-------NLDTPPSTSDEEED 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Flt1NP_034358.2 IG_like 40..129 CDD:214653
Ig 46..127 CDD:299845
IG_like 144..220 CDD:214653
IG_like 238..329 CDD:214653
Ig 246..328 CDD:299845
Ig 354..425 CDD:299845 2/3 (67%)
IG_like 440..553 CDD:214653 25/112 (22%)
Ig 452..550 CDD:143165 22/97 (23%)
IG 570..641 CDD:214652 24/87 (28%)
IGc2 570..641 CDD:197706 24/87 (28%)
I-set 662..749 CDD:254352 10/88 (11%)
IGc2 677..739 CDD:197706 7/61 (11%)
PKc_like 820..1157 CDD:304357 140/341 (41%)
Pkinase_Tyr 828..1154 CDD:285015 137/330 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 947..983 2/35 (6%)
htlNP_524394.2 Ig 112..191 CDD:299845 25/110 (23%)
IG_like 113..191 CDD:214653 25/109 (23%)
IG_like 205..289 CDD:214653 29/164 (18%)
PKc_like 404..692 CDD:304357 143/347 (41%)
STYKc 416..688 CDD:214568 137/330 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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