DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fli1 and pnt

DIOPT Version :9

Sequence 1:NP_032052.1 Gene:Fli1 / 14247 MGIID:95554 Length:452 Species:Mus musculus
Sequence 2:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster


Alignment Length:653 Identity:142/653 - (21%)
Similarity:184/653 - (28%) Gaps:353/653 - (54%)


- Green bases have known domain annotations that are detailed below.


Mouse     8 ALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQPHKINPLPPQQEWINQPVRVNVKREYDH 72
            :||.:||.:        |:..:|.|                  |||.....|:.|...:|..:  
  Fly   130 SLSDISDHE--------ASLEVPTA------------------LPPLTPGTNRKVNEVLKASF-- 166

Mouse    73 MNGSRESPVDCSVSKCNKLVGGGEANPMNYNSYMDEKNGPPPPNMTTNERRVIVPADPTLWTQEH 137
              .|.|.    .|.|||                                    :..||..||:||
  Fly   167 --ASWEK----EVQKCN------------------------------------ITKDPREWTEEH 189

Mouse   138 VRQWLEWAIKEYGLMEIDTSFFQNMDGKELCKMNKEDFLRATSAYNTEVLLSHLSYLR------- 195
            |..||.||..|:.|:.::...|..|.|:.:..:.||.||..|..:..::|..||..|:       
  Fly   190 VIYWLNWAKNEFSLVSMNLDPFYKMKGRAMVDLGKEKFLAITPPFTGDILWEHLDILQKDCEKPN 254

Mouse   196 ---------ESSLLA-------------------------------------------------- 201
                     ||:..|                                                  
  Fly   255 EDIVHGNSFESATTASVCGSDHQVANYPNETHANSNNSSINSRLSMDYVTSAGNSDNKNFHRATP 319

Mouse   202 -----YNT-----------------------------------------------------TSHT 208
                 |||                                                     :|:|
  Fly   320 HSHNGYNTSNTHDRINNSTPPQQQQSQQPTVNGSGSASSNNNNSMLPPAVQQSNNENNNTSSSNT 384

Mouse   209 DQSSRLN-----------------------------------VKEDPSYDSVRRGAWNNNMNS-- 236
            :.||..|                                   :||:|...:...|.:....||  
  Fly   385 NNSSNNNNNSGGSNNSNAGSNNNNNNNNNINFMAAAAIFQHHLKEEPGTQNGNIGGYGGGSNSQN 449

Mouse   237 -------------------GLNKSPLLGGS----------------------QTMGKNTE----- 255
                               |....|..|.|                      |:.|.|..     
  Fly   450 DPTDLSSYGLPAHLAAYGGGSGSGPTGGRSSGGGGDESDYHSTISAQDHQSQQSSGGNGSGGASG 514

Mouse   256 -----------------------------QRPQPDPY-----QILGPTSSRL---------ANP- 276
                                         ..|:..||     |.:||..:.:         .:| 
  Fly   515 GSTGNSNGYLDSSSEFYGSYAGRNRFHDGYPPEFTPYDAQSFQSMGPQPTAMDQWGAAHAHQHPA 579

Mouse   277 --------------------------GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPD 315
                                      |||.|||||||||||.|....|.|:|.|...|||:||||
  Fly   580 AYMSTLGLDKGLLGGYTTQGGVPCFTGSGPIQLWQFLLELLLDKTCQSFISWTGDGWEFKLTDPD 644

Mouse   316 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKF--DFHGIAQALQPHPTETSM 378
            |||||||.||:||.|||:||||.|||||||||:.|..||||.|:|  |.    |.|..|..|..:
  Fly   645 EVARRWGIRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDL----QNLVGHTPEELV 705

Mouse   379 YKY 381
            .||
  Fly   706 AKY 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fli1NP_032052.1 SAM_PNT-FLI-1 114..204 CDD:188883 29/160 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..260 9/100 (9%)
ETS 280..363 CDD:197710 58/84 (69%)
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879 25/70 (36%)
ETS 609..693 CDD:197710 57/83 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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