DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fgfr2 and Cad96Ca

DIOPT Version :9

Sequence 1:NP_034337.2 Gene:Fgfr2 / 14183 MGIID:95523 Length:840 Species:Mus musculus
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:758 Identity:218/758 - (28%)
Similarity:347/758 - (45%) Gaps:170/758 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse   169 NQRAP--------YW--TNTEKMEKRLHAVPAAN----------TVKFRCPAGGNPTPTMRWLKN 213
            ||.||        .|  :.|||:.:.:..|.|.:          ..:|..|.|.|.......:  
  Fly    50 NQNAPPILYVRERNWRISETEKVGQIIDRVRAEDPDGDDLIFGIEPRFSLPGGENDASPPEKI-- 112

Mouse   214 GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGN---YTCLVENEYGSINHTYHLDVVER---SP 272
              .|:.:...|...:.        ||:......|   |..:.:..|.:.|..:...:.||   |.
  Fly   113 --PFQIDRETGVVTLN--------ESLAGRAGQNFLIYITVTDGSYTAKNEVFINILGERENSSG 167

Mouse   273 HRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQ-------------WIKHVEKN-------- 316
            :||      ..:.|.||....:|:.:.  |..|.:|             |...|.:|        
  Fly   168 YRP------QTSISNVVHNISQFLPRF--DQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFGPPPF 224

Mouse   317 GSKY--GPDGLPYLKVLKAAGVNTTDKEI---EVLYIRNVTFEDAGEYTCL-AGNSIGISFHSAW 375
            |:.|  .|..:|.::..::......|:|:   ..:.|.:.|.:...:.|.: |.||..:......
  Fly   225 GNNYPPPPPNIPGVRGEQSGEEEQPDEEVTPTTPVRISSTTPKSRTKLTPITANNSTRVESAIPA 289

Mouse   376 LTVLPAPVREKEITASPDYLEIAIY-----------CIGVFLIACMVVTVIFCR---------MK 420
            .|..|:...... ::||    |.|:           .:|.|.:|..|:....||         :|
  Fly   290 ETTTPSGGHHNN-SSSP----ITIFSLKSGTIPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLK 349

Mouse   421 TTTKKPDFSSQPAVHKLTKRIPLRRQVTVSAESSSSM------------NSNTPLVR------IT 467
            .|.:|.:.:.:....:|:.        |::.:|.:||            |...|..|      .|
  Fly   350 KTKEKEELAKKSNQSQLSS--------TLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIAT 406

Mouse   468 TRLS--------STADTP---------------MLAGVSEYELPED--------PKWEFPRDKLT 501
            ::||        |:...|               :..|......||:        .:|||||.:|.
  Fly   407 SQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLK 471

Mouse   502 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 566
            ....||||.||||...||..|:.:  :...|||||.||:.|||.|..||:||:|:||.:..|.|:
  Fly   472 FFNILGEGAFGQVWRCEATNINGN--EGITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINV 534

Mouse   567 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 631
            ::|||.||...|.:||:||.::|.|:.|||:.|   .|..|.........:|..||.|..||:|:
  Fly   535 VHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSR---AERHYGNTHGKSNVLTSCDLTSFMYQVAK 596

Mouse   632 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 696
            ||:||.|:..|||||||||:|:|:::..|:||||.|||:.....|::.:.|:||::|||.|:|:|
  Fly   597 GMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYD 661

Mouse   697 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPTNCTNELYMMMRDCWHA 761
            .:::.:||:||||:|||||.|||.:|||||...::.:.:::|:|::||.:|..|||.:|..||..
  Fly   662 NIFSVKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSH 726

Mouse   762 VPSQRPTFKQLVEDLDRILTLTTNEEYLDLTQPLEQYSPSYPD 804
            .|.:||.|.::::.||::  |.|..:|::|.:        :||
  Fly   727 DPQERPLFAEIIQMLDKL--LHTEMDYIELER--------FPD 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fgfr2NP_034337.2 Ig 66..143 CDD:325142
Ig2_FGFR 183..267 CDD:143265 14/96 (15%)
Ig3_FGFR-2 290..379 CDD:143266 20/115 (17%)
PTKc_FGFR2 475..787 CDD:270679 138/334 (41%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637 19/110 (17%)
STYKc 470..741 CDD:214568 125/275 (45%)
PTKc 474..742 CDD:270623 124/272 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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