DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBD2 and pnpla6

DIOPT Version :9

Sequence 1:XP_011526892.1 Gene:CNBD2 / 140894 HGNCID:16145 Length:617 Species:Homo sapiens
Sequence 2:XP_005160109.1 Gene:pnpla6 / 560986 ZFINID:ZDB-GENE-050107-4 Length:1343 Species:Danio rerio


Alignment Length:453 Identity:87/453 - (19%)
Similarity:149/453 - (32%) Gaps:148/453 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    31 EEESEEEPECLEIDFKSRTLSVRRFG---------LQ-----GLYQLAMDIIIMIRVCKMF---R 78
            :.||.|.||            ..|||         ||     |:...|..:|::|.|...|   |
Zfish     7 DTESAEPPE------------TDRFGNIKSLVEDQLQTSMVVGIVIGAGVVIVLIAVLIFFVLRR 59

Human    79 QGLRGFREYQIIETAHWKHPIFSFWDKKMQSRVTFDTMDFIAEEGHFPPK--------------- 128
            ..||.....::.:....|.....|:.:|:..:|:..|...:.......|:               
Zfish    60 MQLRKLEAQEVPKYRFRKRDKVLFYGRKIMRKVSQSTSSLVGATSSTRPRLKKKQKMLNIAKKIL 124

Human   129 -------AIQIMQKKPSWRTEDEIQ-AVCN------ILQVLDSYR---NYAEPLQLLLAKVMRFE 176
                   .:|:.:..||....|..: .|.|      :|.:|.:.|   ::.:||.|.|.|.|.|.
Zfish   125 RFKKEVPTLQMKEPPPSVLEADLTEFDVANSHLPSEVLYMLKNVRVLGHFEKPLFLELCKHMVFL 189

Human   177 RFGRRRVIIKKGQKGNSFYFIYLGTVAI-TKDEDGSSAFLDPHPKLLHKG----SCFGEMDVLHA 236
            :|.:...:.:.||..:|.|.:..|.:.: ...:||....:    |.::.|    |....:||:..
Zfish   190 QFQQGEYVFRPGQPDSSIYVVQDGKLELCLTGQDGKDGVV----KEVYPGDSVHSLLSILDVITG 250

Human   237 SVRRSTIVCMEETEFLVVDR--EDFFANKLDQEVQKDAQYRFEFFRKMELFASWSDE--KLWQLV 297
            ..|....|.....|...|.|  .|.|                     :.:|..:.:.  ::.|::
Zfish   251 HQRPYKTVSARAAEVSTVLRLPVDAF---------------------LSIFEKYPESLVRVVQII 294

Human   298 AMAKIERFSYGQLISKDFGESPFIMFISKGSCEVLRLLD-LGASPSYRRWIWQHLELIDGRPLKT 361
             |.:::|.:                        ||.|.: ||.:..    ::.|.......||..
Zfish   295 -MVRLQRVT------------------------VLALHNYLGLTNE----LFSHEMQPRSSPLSP 330

Human   362 HLSEYSPMERFKEFQIKSYPLQDFSSLKLPHLKKAWGLQGTSFSRKIRTSGD------TLPKM 418
            |.:..||:...|.          |.||.:|...:...:|..       |.||      |:|.:
Zfish   331 HPTRSSPVRHSKR----------FGSLTVPDKHREAAVQNA-------TGGDHGKEGGTIPTL 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBD2XP_011526892.1 Crp 151..>282 CDD:223736 30/140 (21%)
CAP_ED 163..259 CDD:237999 25/102 (25%)
pnpla6XP_005160109.1 TM_EGFR-like 31..64 CDD:213052 9/32 (28%)
Crp 164..>302 CDD:223736 33/163 (20%)
CAP_ED 170..291 CDD:237999 28/145 (19%)
Crp 466..>596 CDD:223736
CAP_ED 467..577 CDD:237999
CAP_ED 590..698 CDD:237999
Crp 605..>706 CDD:223736
Pat_PNPLA6_PNPLA7 921..1226 CDD:132864
RssA 926..1216 CDD:224666
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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