DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNBD2 and pnpla7b

DIOPT Version :9

Sequence 1:XP_011526892.1 Gene:CNBD2 / 140894 HGNCID:16145 Length:617 Species:Homo sapiens
Sequence 2:XP_692276.5 Gene:pnpla7b / 503936 ZFINID:ZDB-GENE-050309-66 Length:1340 Species:Danio rerio


Alignment Length:593 Identity:115/593 - (19%)
Similarity:192/593 - (32%) Gaps:190/593 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    90 IETAHWKHPIFSFWDKKMQSRVTFDTMDFIAEEGHFPPKAIQIMQKKPSWRTEDEIQAVCN---- 150
            :|:.|...|     |..|       |.|..::|....|.|||...:|.|........||.:    
Zfish   398 LESTHAGSP-----DHNM-------TFDRSSKEAPSSPIAIQKSNRKKSVTMHHSPSAVFHYSDT 450

Human   151 --------------ILQVLDSYRNYAEPLQL----LLAKVMRFERFGRRRVIIKKGQKGNSFYFI 197
                          |.|.  :.|:..:.:||    ||...:...:.....|:..:|.:..|..|:
Zfish   451 GGHSSHIHHSKVNAIFQA--AKRDLLKIIQLQDPNLLEDRVTLRQVKAGSVVASEGDQDVSVQFV 513

Human   198 YLGTVAITK---DEDGSSAFLDPHPKLLHKGSCFGEMDVLHA-----SVRRSTIVCMEETEFLVV 254
            ..||:.:.:   |.:..|.....||     |...|.:.||..     |||.....|     ||.:
Zfish   514 ISGTLHVYQRLIDREEQSCLFVAHP-----GEMVGHLAVLTGEPLIFSVRAQRDCC-----FLSI 568

Human   255 DREDFFANKLDQEVQKDAQYRF-------------EFFRKMELFASWSDEKLWQLVAMA-KIERF 305
            .:..|:      |:.: |:.|.             .|.|:::....|          || :..|.
Zfish   569 SKTHFY------EIMR-AEPRMVLNVAHTVVRRVSSFVRQIDFALDW----------MALEAGRA 616

Human   306 SYGQLISKDFGESPFIMFISKGSCEVLRLLDLG---ASPSYRRWIWQHLELIDGRPLKTHLSEYS 367
            .|.|   .|..:|.||  :..|....:.:.|.|   .:..|.|.     :||......|||:..:
Zfish   617 VYRQ---GDKSDSTFI--VLSGRLRSVIMKDDGKKELAGEYGRG-----DLIGVVEALTHLNRAT 671

Human   368 PMERFKEFQIKSYPLQDFSSLK---------LPHL--KKAWG-LQGTSFSRKIRTSGDTLPKMLG 420
            .:...::.::...|....:|:|         |.||  :|..| :|..:....:|:.|...|....
Zfish   672 TVHAVRDSELAKLPEGALNSIKRKYPQVVTRLIHLLGQKILGNMQQVNGPLSVRSLGFHSPTSKW 736

Human   421 PKIQSRPAQSIKCAMINIKPGELPKEA---------------------------AVGAYVKVHTV 458
            .  ...||.::....|.....|:|..|                           .|.|...||..
Zfish   737 D--AGNPAANLSTVTILPVSEEVPLTAFTLELQHALSAIGPTLLLTSDIIRQRLGVAALDSVHEY 799

Human   459 EQGEILG----LHQAFLPEGECDTRP-----------LILMSLGNE--------------LIRIR 494
            .....||    :|:..|.:.:....|           :|::.||.:              .:|.:
Zfish   800 RLSSWLGQQEDIHRIVLYQSDGSLTPWTQRCIRQADCIIIVGLGEQEPTVGELERMLESSAVRAQ 864

Human   495 KEIFYELIDNDDEMIKKLLKLNIAFPSDEDMCQKFLQQNSWNIFRKDLLQLLVEPCQSQLFT-PN 558
            |::.  |:..:|.            |......: :|...||      :.:.|...|..::|: .:
Zfish   865 KQLV--LLHREDG------------PPPAGTVE-WLNMRSW------ISRHLHLSCPHRVFSRRS 908

Human   559 RPKKREIY 566
            .||.||:|
Zfish   909 LPKLREMY 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBD2XP_011526892.1 Crp 151..>282 CDD:223736 33/155 (21%)
CAP_ED 163..259 CDD:237999 24/107 (22%)
pnpla7bXP_692276.5 Crp 164..354 CDD:223736
CAP_ED 170..291 CDD:237999
Crp 470..>602 CDD:223736 31/148 (21%)
CAP_ED 473..583 CDD:237999 27/126 (21%)
Crp 596..>718 CDD:223736 31/141 (22%)
CAP_ED 596..704 CDD:237999 25/127 (20%)
Pat_PNPLA6_PNPLA7 927..1232 CDD:132864
RssA 932..1234 CDD:224666
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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