DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CNBD2 and M110.7

DIOPT Version :9

Sequence 1:XP_011526892.1 Gene:CNBD2 / 140894 HGNCID:16145 Length:617 Species:Homo sapiens
Sequence 2:NP_495734.3 Gene:M110.7 / 187474 WormBaseID:WBGene00010915 Length:1095 Species:Caenorhabditis elegans


Alignment Length:620 Identity:114/620 - (18%)
Similarity:206/620 - (33%) Gaps:198/620 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    36 EEPECLEIDFKSRTLSVRRFGLQGLYQLAMDIIIMI-----------------RVC--KMFRQGL 81
            ::.|.|.||..|..||..|         |.|:|:::                 ..|  |..|.|.
 Worm   142 KDVETLSIDTGSVVLSPGR---------ANDVIVVVISGELGIFTNVSLGDKRYDCNIKTLRSGE 197

Human    82 RGFREYQIIET----------AHWK---------HPIFSF----------WDKKMQ------SRV 111
            ..|.:..|||.          .|.|         :.:.||          |.:.:|      .:.
 Worm   198 SYFSQTSIIEILMNEKPNNKYIHLKALTSCRVATYHLTSFHTSFIANPQQWIRTIQVVMTRLQQC 262

Human   112 TFDTMDFIAEEGHFPPKAIQIMQKKP--------SWRTEDE-----IQAVCNILQVLDSYRNYAE 163
            |..|.:.....|   .|.:...:|.|        :..||.|     ::|:...:.:.|......|
 Worm   263 TLITCNMYLGIG---GKCLNAKRKLPDSGKFKDFNKLTEAEQLNKGVEAIAQAMGIPDQSDKLRE 324

Human   164 PLQLLLAKVMRFE-RFGRRRVIIKKGQKGNSF----YFIYLGTVAITK-----DEDGSSAFLDPH 218
                   ||.::| :.|  .|:.::    |||    .|:..|.:.:.:     |:.|:|...|.:
 Worm   325 -------KVRKYECQAG--TVVTEE----NSFEIDMIFVVFGKLRLKRGDLEHDDTGTSLTFDVY 376

Human   219 PKLLHKGSCFGEMDVLHASVRRSTIVCMEETEFLVVDREDF----FANKLD--QEVQKDAQYRFE 277
            |     |.....|.:|.......:...:|:|.:..:.|:::    ||:.:.  :......|:...
 Worm   377 P-----GDMLPSMQILTNEPAMCSAKALEKTIYFKICRDEYIQFLFAHPVIYLRLAFHALQFISP 436

Human   278 FFRKMELFASWSDEKLWQLVAMAKIERFSYGQLISKDFGESPFIMFISKGSCEVLRLLD-LGASP 341
            |.|..::...|              .|...||.:.:...:|..:..:..|.   ||.:| .....
 Worm   437 FARVFDMAVHW--------------HRIETGQALFRQGDKSDSMHIVMGGR---LRAVDSTKIIE 484

Human   342 SYRRWIWQHLELIDGRPLKTHLSEYSPME------RFKEFQIKSYPLQDFSSLKLPH-------- 392
            .|.|     |:||.    .|.::|..|..      ||.........|..|..::.|.        
 Worm   485 EYGR-----LDLIG----ITDMAEKRPRRNTVMAVRFSHIVCIPENLLSFVKIRYPQVGNKLLKL 540

Human   393 LKKAWGLQ--------GTSFSRKIRTSGDTLPKMLGPKIQSRPAQSIKCAMIN-----IKPGELP 444
            :.|.|...        .|:.::.:||..      :.|..:..|.....|.:.|     :|...| 
 Worm   541 ISKCWKAPTPETMSHVETTRNQNLRTIA------IVPASRRVPLTEFTCELYNQLSKHVKTLRL- 598

Human   445 KEAAVGAYVKVHTVEQGEILGL-HQAFLPE-------GECD------TR-------PLILMSLGN 488
            ..:.|..|.:...:.:....|| |...:.|       .:||      ||       .:::::||.
 Worm   599 SSSVVENYFESEVITKKADYGLMHWLNVQEIAYSLVLYQCDFHKTNWTRRCLRMADAILMVALGT 663

Human   489 ELIRIRKEIFYE-LIDNDDEMIKKLLKLNIAFPSD 522
            |  ...:::..| |:..:::.:::..:|...:|.|
 Worm   664 E--SKEEQVLAEALLSCNEKGVRQSKELVFLWPID 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNBD2XP_011526892.1 Crp 151..>282 CDD:223736 28/146 (19%)
CAP_ED 163..259 CDD:237999 22/105 (21%)
M110.7NP_495734.3 CAP_ED 316..427 CDD:237999 25/128 (20%)
Crp 325..>432 CDD:223736 23/117 (20%)
Crp 423..>543 CDD:223736 25/145 (17%)
CAP_ED 444..538 CDD:237999 22/119 (18%)
Patatin_and_cPLA2 752..1040 CDD:299702
RssA 756..1046 CDD:224666
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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