DRSC/TRiP Functional Genomics Resources

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Protein Alignment ptprsa and Ptp36E

DIOPT Version :9

Sequence 1:XP_021325154.1 Gene:ptprsa / 140820 ZFINID:ZDB-GENE-020107-3 Length:1945 Species:Danio rerio
Sequence 2:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster


Alignment Length:589 Identity:188/589 - (31%)
Similarity:303/589 - (51%) Gaps:57/589 - (9%)


- Green bases have known domain annotations that are detailed below.


Zfish  1393 EYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILAPIEGITGSDYINSNYIDGYRKQNA 1457
            |:::....:..|..|:..:.|..||:....|.||::||:|..:.|:..|||:|::|:|...|.||
  Fly   105 EFQTAAKVESNTCRHALKKNNLEKNQNPKCIPYDYNRVVLEKVGGLQDSDYVNASYVDSLLKPNA 169

Zfish  1458 YIATQGPLPETFGDFWRMVWEQRAATVVMMTRLEEKSRIKCDQYWPSRGT--ETYGMIQVTLLDT 1520
            ||.||||:.||...:|||||::..:.:||:|:..:.:::.|.||||....  |.||.|.:.::..
  Fly   170 YIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAKVMCHQYWPPNMEVHEQYGDIFINIVRE 234

Zfish  1521 IELATFCVRTFSLHKNGSSEKREVR------QFQFTAWPDHGVPEYPTPFLAFLRRVKTC----- 1574
            .:||.|.:|||.|:|  .:||:||.      ||.:|.|..|..| :....|.|.|||:..     
  Fly   235 EQLANFHIRTFRLYK--MNEKQEVTDERLILQFHYTEWYSHSCP-FSNALLEFRRRVRLVVGNII 296

Zfish  1575 -NPPD-AGPIIAHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRSQRNYMVQTEDQYSF 1637
             :..| .|||:.|||.|.||:|.::.|||.||..:.|:..:::|::..:|..|..:|:..:||.|
  Fly   297 KDEDDMRGPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFGYLKKLRQSRKGLVENVEQYKF 361

Zfish  1638 IHDALLEAVACGNTEVAARSLFSYIQKLAQVEAGEHVSGMELEFKRLANSKAHTSRFISANLPC- 1701
            |:|.|.|.:.||.|......|...::..|:..:|..::..:.|:.::..   .|.||...:  | 
  Fly   362 IYDTLEEHIICGKTWFPVSELSDRLKAKARRNSGTKMNEYQAEYDQICK---QTPRFTIGD--CA 421

Zfish  1702 ------NKFKNRLVNIMPYETTRVCLQPIRGLEGSDYINSSFIDGYRQQKAYIATQGPLAETTED 1760
                  |:.|||.|..:|.:..|..|...:|...:|||||.|:|||.:.:.||.|:.|:..|..:
  Fly   422 GGHRADNREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVDGYTKPREYIVTEWPMKHTLGE 486

Zfish  1761 FWRMLWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQY------FVVDPMAEYNMPQYILRE 1819
            ||.::::...:.||:|.:..... ::...:|| .:|...:|      ..|...:..|:.|:   |
  Fly   487 FWSLVYDQECSAVVVLCQPPSQS-QQYPSFWP-NKSKMEKYGPVFSVHYVMSKSYTNIKQW---E 546

Zfish  1820 FKV-------TDARDG---QSRTVRQFQFTDWP-EQGVPKSGEGFIDFIGQVH--KTKEQFGQDG 1871
            ||:       |:...|   .:|||:.||.|.|| ...||.|....:..:..|.  :.|..:   |
  Fly   547 FKINKKIVSLTEMMAGVKAPTRTVQLFQLTCWPMGHKVPSSTNSLVYLMNMVEIWRNKVDY---G 608

Zfish  1872 PISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQFCYQAALEY 1936
            |:.|....|..|.||:...:..:|::...|.||:||.||.:|..||.:|:...||::||...|.|
  Fly   609 PVCVVSPDGRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMTEYKYCYDLVLHY 673

Zfish  1937 LGSF 1940
            :..|
  Fly   674 VLHF 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ptprsaXP_021325154.1 I-set 31..122 CDD:254352
Ig2_RPTP_IIa_LAR_like 150..233 CDD:319301
Ig3_RPTP_IIa_LAR_like 257..325 CDD:143216
FN3 330..419 CDD:238020
FN3 426..518 CDD:238020
FN3 523..612 CDD:238020
FN3 620..713 CDD:238020
fn3 721..819 CDD:306538
FN3 831..919 CDD:238020
fn3 931..1015 CDD:306538
FN3 1028..1101 CDD:238020
PTPc 1415..1644 CDD:238006 93/243 (38%)
PTPc 1676..1935 CDD:214550 81/284 (29%)
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 94/245 (38%)
Y_phosphatase 428..671 CDD:395053 76/250 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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