DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRIM69 and ZK1240.8

DIOPT Version :9

Sequence 1:NP_892030.3 Gene:TRIM69 / 140691 HGNCID:17857 Length:500 Species:Homo sapiens
Sequence 2:NP_494242.1 Gene:ZK1240.8 / 191542 WormBaseID:WBGene00022872 Length:292 Species:Caenorhabditis elegans


Alignment Length:338 Identity:77/338 - (22%)
Similarity:123/338 - (36%) Gaps:90/338 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    41 CPLCN------DWFRDPLMLSCGHNFCEACIQDFWRLQAKETFCP-ECKMLCQYNNCTFNPVLDK 98
            |.:||      |..|.|.:|.|||:.|:.|....  :......|| :|....:..|..       
 Worm     6 CEVCNEDYSNLDESRAPRVLKCGHSICQNCAVKL--ISNSVILCPKKCSETTEVQNGN------- 61

Human    99 LVEKIKK-------LPLLKGH-----PQCPEHGENLKLF--SKPD----GKLICFQCKDARLSVG 145
             ||.::|       :.:::..     |:|.||..|:..|  |:.|    .||:|..|::..:..|
 Worm    62 -VESLQKNFGLMQAMEMMEASSSNSPPKCKEHRYNIAEFLCSEHDCPSIDKLMCRTCEEFGVHTG 125

Human   146 QSKEFL-----QISDAVHFFTEELAIQQGQLETTLKELQTLRNMQKEAIAAHKENKLHLQQHVSM 205
            .:|..:     :|.|.:....:::.:........|:|.:...:.::..|....|.|.|       
 Worm   126 HTKVLMSVEAGKIRDVLECRLKQMKLNAESFTVQLEEFREAMSNRQLFIEKLSEIKYH------- 183

Human   206 EFLKLHQFLHSKEK---DILTELREEGKALNEEMELNLSQLQEQCLLAKDMLVSIQAKTEQQNSF 267
             |.::.|.:..:||   |.||....|....|:|.|.|:.:||: |||         .|.||...|
 Worm   184 -FSRIRQLVDEREKRITDKLTFNTTEIYKCNKETESNMKRLQD-CLL---------EKIEQTTKF 237

Human   268 DFLKDITTLLHSLEQGMKVLATRELISRKLNLGQYKGPIQYMVWREMQDTLCPGLSPL---TLDP 329
            ..:.|...|...::.|              .|..|..||...            .||.   |:|.
 Worm   238 SKISDYQLLQADIDLG--------------GLTWYHSPITQK------------FSPADTKTMDV 276

Human   330 KTAHPNLVLSKSQ 342
            |......|:.|.|
 Worm   277 KLPAFKFVVKKQQ 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRIM69NP_892030.3 Necessary for nuclear localization. /evidence=ECO:0000250 1..152 33/140 (24%)
RING 41..81 CDD:302633 14/46 (30%)
iSH2_PI3K_IA_R 168..299 CDD:304922 30/133 (23%)
SPRY_PRY_TRIM69 311..497 CDD:293990 8/35 (23%)
ZK1240.8NP_494242.1 RING_Ubox 3..48 CDD:388418 12/43 (28%)
modified RING-HC finger (C3HC3D-type) 6..47 CDD:319361 12/42 (29%)
Bbox_SF 86..135 CDD:381767 14/48 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 65 1.000 Inparanoid score I4419
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.