DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRX and PHDP

DIOPT Version :10

Sequence 1:NP_000545.1 Gene:CRX / 1406 HGNCID:2383 Length:299 Species:Homo sapiens
Sequence 2:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster


Alignment Length:112 Identity:47/112 - (41%)
Similarity:62/112 - (55%) Gaps:17/112 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    38 KQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQK 102
            ||||.|||||.:||.|||.:|.:|.|||:|.|||:|.|::|.|:||||||:|||||.|:|.:...
  Fly   111 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAI 175

Human   103 QQQQPPGGQAKARPAKRKAGTSPRPSTDVCPDPLGISDSYSPPLPGP 149
            ...:....:...|                 .:|:..|....|.|.||
  Fly   176 YIMKDKSSKLDGR-----------------KNPVAGSKYLGPSLKGP 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRXNP_000545.1 Homeodomain 40..93 CDD:459649 34/52 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..155 10/57 (18%)
TF_Otx 164..249 CDD:427350
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 36/55 (65%)
Blue background indicates that the domain is not in the aligned region.

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