DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRX and Crx

DIOPT Version :10

Sequence 1:NP_000545.1 Gene:CRX / 1406 HGNCID:2383 Length:299 Species:Homo sapiens
Sequence 2:NP_001106801.1 Gene:Crx / 12951 MGIID:1194883 Length:323 Species:Mus musculus


Alignment Length:299 Identity:289/299 - (96%)
Similarity:291/299 - (97%) Gaps:0/299 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MMAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQLEELEALFAKTQYPD 65
            |||||||||||||||||||||:||||||||||.||||||||||||||||||||||||||||||||
Mouse    25 MMAYMNPGPHYSVNALALSGPNVDLMHQAVPYSSAPRKQRRERTTFTRSQLEELEALFAKTQYPD 89

Human    66 VYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQQQPPGGQAKARPAKRKAGTSPRPSTD 130
            ||||||||||||||||||||||||||||||||||||||||||||.|.||||||||||||||||||
Mouse    90 VYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQQQPPGAQTKARPAKRKAGTSPRPSTD 154

Human   131 VCPDPLGISDSYSPPLPGPSGSPTTAVATVSIWSPASESPLPEAQRAGLVASGPSLTSAPYAMTY 195
            ||.|||||||||||.|||||||||||||||||||||||:||||||||||||||||||||||||||
Mouse   155 VCTDPLGISDSYSPSLPGPSGSPTTAVATVSIWSPASEAPLPEAQRAGLVASGPSLTSAPYAMTY 219

Human   196 APASAFCSSPSAYGSPSSYFSGLDPYLSPMVPQLGGPALSPLSGPSVGPSLAQSPTSLSGQSYGA 260
            |||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||..
Mouse   220 APASAFCSSPSAYASPSSYFSGLDPYLSPMVPQLGGPALSPLSGPSVGPSLAQSPTSLSGQSYST 284

Human   261 YSPVDSLEFKDPTGTWKFTYNPMDPLDYKDQSAWKFQIL 299
            |||||||||||||||||||||||||||||||||||||||
Mouse   285 YSPVDSLEFKDPTGTWKFTYNPMDPLDYKDQSAWKFQIL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRXNP_000545.1 Homeodomain 40..93 CDD:459649 52/52 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..155 57/61 (93%)
TF_Otx 164..249 CDD:427350 82/84 (98%)
CrxNP_001106801.1 Homeodomain 64..117 CDD:459649 52/52 (100%)
TF_Otx 188..273 CDD:427350 82/84 (98%)

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