DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eya3 and eya

DIOPT Version :9

Sequence 1:XP_006538600.1 Gene:Eya3 / 14050 MGIID:109339 Length:572 Species:Mus musculus
Sequence 2:NP_723188.1 Gene:eya / 33916 FlyBaseID:FBgn0000320 Length:766 Species:Drosophila melanogaster


Alignment Length:629 Identity:240/629 - (38%)
Similarity:323/629 - (51%) Gaps:141/629 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse    14 KAKMQEPREQTLSQVNNPDASDEKPETSSLASNLS------MSEEIMTCTDYIPRSSNDY----T 68
            |::.:.|.:...|..|...|.......||.::.|.      .|..:......:....:||    :
  Fly   209 KSESRSPGQVHASLDNGSVAGSNLYGCSSASNPLDGGAVAVNSSAVAAAAAAVYDGKHDYYYYNS 273

Mouse    69 SQMYSAKPYAHILSVPVSETTYPGQTQYQTLQQSQPYAVYPQATQTYGLPPFGALWPGMKPESGL 133
            .|.|:..|:            |.|   |.|     |||....|.|.             |.|.| 
  Fly   274 MQQYTPPPF------------YSG---YGT-----PYAAATAARQA-------------KMEPG- 304

Mouse   134 IQTPSPSQHSVLTCTTGLTTSQPSSAHYSYPIQASSTNASLIPTSSAIANIPAAAVASISNQDY- 197
                                :..::|.|..|..|:|.|     .:|.:.:.|.|...:...||| 
  Fly   305 --------------------AAAAAAAYLTPSYAASGN-----NNSQLYSSPYAGYNNFGQQDYG 344

Mouse   198 --------PTYTILGQNQYQACYPSSS------FGVTGQTN-SDAETTTLAATTYQTEKPSAMVP 247
                    ..|:....:.|....||||      |.|...:| |::.|.|.:.|.......|...|
  Fly   345 GYYNEQYGNYYSPANYSPYAVSSPSSSASHGHGFHVAASSNLSESPTDTHSTTPVHQTTHSPHSP 409

Mouse   248 APATQRLPSDSSASPPL------------------------------SQTTPNKDADDQARKNMT 282
            .|.:   ||..|...||                              |:|||.         ..|
  Fly   410 LPIS---PSTGSGIGPLGNVSAAAAAAALNSSGGSSVGTAGSGGVATSKTTPT---------GKT 462

Mouse   283 VKNRGKR-------KADASSSQDSEL----ERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTVVI 336
            .:.||:|       ::.||.:.:||.    ||||:||||||:||||:||:||||.:|.||.:.::
  Fly   463 GRARGRRHQQPSPTRSTASDTGNSEAVKPPERVFVWDLDETLIIFHTLLSGSYANRYTKDHSSLM 527

Mouse   337 GSGLTMEEMIFEVADTHLFFNDLEECDQVHVEDVASDDNGQDLSNYSFSTDGFSGSGGSGSHGS- 400
            .....||||:|.:||||.|||::|||||||::||:|||||||||.|:|:||||..:...|:..: 
  Fly   528 TIAFRMEEMVFNMADTHFFFNEIEECDQVHIDDVSSDDNGQDLSAYNFATDGFHTNTPPGAPPNL 592

Mouse   401 --SVGVQGGVDWMRKLAFRYRKVREIYDKHKSNVGGLLSPQRKEALQRLRAEIEVLTDSWLGTAL 463
              ..||:|||||||||||||||:::||:.::.|||.||.|.::||..::|:||||.||:|...||
  Fly   593 CLPTGVRGGVDWMRKLAFRYRKIKDIYNSYRGNVGTLLGPGKREAWLQIRSEIEVATDNWATLAL 657

Mouse   464 KSLLLIQSRKNCANVLITTTQLVPALAKVLLYGLGEIFPIENIYSATKIGKESCFERIVSRFGKK 528
            |.|.:|..|:||.|||:|:|||.||||||||:|||.||.|||||||.|||.|:|:||||:|||:|
  Fly   658 KCLSMISQRENCVNVLVTSTQLAPALAKVLLFGLGGIFNIENIYSAHKIGHETCYERIVTRFGRK 722

Mouse   529 VTYVVIGDGRDEEIAAKQHNMPFWRITNHGDLVSLHQALELDFL 572
            .||||||||.:||.|||..|.|||||:.|.|:.:|:.||::.||
  Fly   723 STYVVIGDGNEEETAAKAMNFPFWRISAHSDIRALYTALDMGFL 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eya3XP_006538600.1 Med15 <8..>139 CDD:312941 26/134 (19%)
EYA-cons_domain 301..572 CDD:273739 167/277 (60%)
eyaNP_723188.1 DUF3682 413..>485 CDD:289231 15/83 (18%)
EYA-cons_domain 492..766 CDD:273739 167/273 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848728
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3107
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 426 1.000 Inparanoid score I1736
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000834
OrthoInspector 1 1.000 - - otm44043
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10190
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X642
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.850

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