DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and Agtr1b

DIOPT Version :9

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_112271.2 Gene:Agtr1b / 81638 RGDID:2071 Length:359 Species:Rattus norvegicus


Alignment Length:389 Identity:91/389 - (23%)
Similarity:166/389 - (42%) Gaps:93/389 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 MQMDEPAAATQS-IYPHSATLFAAISACVFVTIGVLGNLITLLAL---LKSPTIREHATTAFVIS 77
            :|.|.|.|...: |:....||::.|    || :|:.||.:.::.:   :|..|:    .:.|:::
  Rat    14 IQDDCPKAGRHNYIFVMIPTLYSII----FV-VGIFGNSLVVIVIYFYMKLKTV----ASVFLLN 69

  Fly    78 LSISDLLFCSFSLPLTAVRFFQE-SWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACH 141
            |:::||.|. .:|||.||....| .|.||..||||.......|:..|:..:..::::||:.|. |
  Rat    70 LALADLCFL-LTLPLWAVYTAMEYRWPFGNHLCKIASASVSFNLYASVFLLTCLSIDRYLAIV-H 132

  Fly   142 SRYSQIYKPKFIT-LQLLFVWAVSFLLLLPPILGIWGEMGLDEATFSCTILKKEGRSIKKTL--- 202
            ...|::.:...:. :..:.:|.::.|..||.:  |:..:...|.| :.|:......|...||   
  Rat   133 PMKSRLRRTMLVAKVTCIIIWLMAGLASLPAV--IYRNVYFIENT-NITVCAFHYESQNSTLPIG 194

  Fly   203 -----FVIGFLLPCLVIIVSYSCIYITVLH----QKKKIRNHDNFQIAAAKGSSSSGGGSYMTTT 258
                 .::||:.|.|:|:.||:.|:..:..    ||...||.|.|:|                  
  Rat   195 LGLTKNILGFVFPFLIILTSYTLIWKALKKAYKIQKNTPRNDDIFRI------------------ 241

  Fly   259 CTRKAREDNRLTVMMVTIFLCF------LVCFLPLM----------LANVVDDERNTSYPWLHII 307
                        :|.:.:|..|      :..||.::          :|::||    |:.|    |
  Rat   242 ------------IMAIVLFFFFSWVPHQIFTFLDVLIQLGIIRDCEIADIVD----TAMP----I 286

  Fly   308 ASVMAWASSVINPIIYAASNRNYSESIFYFRVAYY-----KIFALLKFWGEPLSPMPSRNYHQS 366
            ...:|:.::.:||:.|....:.:.:  ::.::..|     |..|.|......||..||.|...|
  Rat   287 TICIAYFNNCLNPLFYGFLGKKFKK--YFLQLLKYIPPTAKSHAGLSTKMSTLSYRPSDNMSSS 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tm_1 52..323 CDD:278431 69/303 (23%)
Agtr1bNP_112271.2 7tm_4 37..262 CDD:304433 62/268 (23%)
7tm_1 45..302 CDD:278431 69/303 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..359 4/10 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24228
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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