DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tre1 and Bdkrb1

DIOPT Version :10

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_110478.1 Gene:Bdkrb1 / 81509 RGDID:620401 Length:337 Species:Rattus norvegicus


Alignment Length:327 Identity:83/327 - (25%)
Similarity:133/327 - (40%) Gaps:81/327 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ISACVFVTIGVLGNLITLLALL--------------KSPTIREHATTAFVISLSISDLLFCSFSL 90
            |:.|.|   |:||||:.|...|              :..||.|    .::.:|:.|||:|. ..|
  Rat    44 ITICFF---GLLGNLLVLSFFLLPWRQWWWQQRQRQQRLTIAE----IYLANLAASDLVFV-LGL 100

  Fly    91 PLTAV----RFFQESWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHSRYSQIYKPK 151
            |..|.    ||   :|.|||.||::...:...|:.||:..:|.|:.:||.|:..........:.:
  Rat   101 PFWAENIGNRF---NWPFGTDLCRVVSGVIKANLFVSIFLVVAISQDRYRLLVYPMTSWGYRRRR 162

  Fly   152 FITLQLLFVWAVSFLLLLPPILGIWGEMGLDEATFSCTILKKE-----GRSIKKTLFVIGFLLPC 211
            ......|.:|....||.:|..|....::..|....:|.:|...     .|.::  |.|:|||||.
  Rat   163 QAQATCLLIWVAGGLLSIPTFLLRSVKVVPDLNVSACILLFPHEAWHFARMVE--LNVLGFLLPV 225

  Fly   212 LVIIVSYSCIYITVLHQKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAREDNRLTVMMVTI 276
            ..||.....|..::..||:..|.    :....|||.::|                     :::|:
  Rat   226 TAIIFFNYHILASLRGQKEASRT----RCGGPKGSKTTG---------------------LILTL 265

  Fly   277 FLCFLVCFLP---------LMLANVVDDERNTSYPWLHI------IASVMAWASSVINPIIYAAS 326
            ...||||:.|         |:...|:.|     ..|..|      :|:..|:.:|.:||:||..:
  Rat   266 VASFLVCWCPYHFFAFLDFLVQVRVIQD-----CSWKEITDLGLQLANFFAFVNSCLNPLIYVFA 325

  Fly   327 NR 328
            .|
  Rat   326 GR 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tmA_GPR84-like 37..341 CDD:320338 83/327 (25%)
TM helix 1 37..63 CDD:320338 10/36 (28%)
TM helix 2 71..94 CDD:320338 7/22 (32%)
TM helix 3 109..139 CDD:320338 9/29 (31%)
TM helix 4 153..171 CDD:320338 4/17 (24%)
TM helix 5 195..220 CDD:320338 10/24 (42%)
TM helix 6 264..294 CDD:320338 8/38 (21%)
TM helix 7 302..327 CDD:320338 9/30 (30%)
Bdkrb1NP_110478.1 7tmA_BK-1 37..333 CDD:320502 83/327 (25%)
TM helix 1 38..64 CDD:320502 10/22 (45%)
TM helix 2 82..107 CDD:320502 9/29 (31%)
TM helix 3 120..150 CDD:320502 9/29 (31%)
TM helix 4 163..184 CDD:320502 5/20 (25%)
TM helix 5 209..238 CDD:320502 11/30 (37%)
TM helix 6 253..283 CDD:320502 10/50 (20%)
TM helix 7 301..326 CDD:320502 7/24 (29%)

Return to query results.
Submit another query.