DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and npy1r

DIOPT Version :10

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001095861.1 Gene:npy1r / 793668 ZFINID:ZDB-GENE-080221-1 Length:380 Species:Danio rerio


Alignment Length:332 Identity:90/332 - (27%)
Similarity:149/332 - (44%) Gaps:53/332 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HSATLFAAISACVFVTIGVLGNLITLLALLKSPTIREHATTAFVISLSISDLLFCSFSLPLTAVR 96
            ||..:..|::....|.:||:|||..:|.:.:...: .:.|...:.:||:||||.....||.|.:.
Zfish    43 HSLFVIMAVAYSAVVLLGVIGNLALILVIARQREL-HNVTNVLIANLSVSDLLMAVVCLPFTFIY 106

  Fly    97 FFQESWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHSRYSQIYKPKF--ITLQLLF 159
            .|.:.|.||..:||:..::...:|:||:.|:|.|.:.|:.|| .|.|.   ::|..  ..|.:..
Zfish   107 TFMDHWVFGAVMCKLNSLVQCCSVSVSIFSLVLIAIERHQLI-LHPRG---WRPSLNHACLGISL 167

  Fly   160 VWAVSFLLLLPPIL-------------GIWGEMGLDEATFSCTILKKEGRSIKKT----LFVIGF 207
            .||::.|...|.:|             .::.|....:..  | :.:...|.||.|    :.|:.:
Zfish   168 TWALAVLTATPFLLFSRVTDAPLKQLPSVFQEQYRGKVV--C-VEEWPSREIKLTYTTGMLVLQY 229

  Fly   208 LLPCLVIIVSYSCIYITVLHQKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAREDNRLTVM 272
            :.|...|.:.|..|| |.|.:    ||:...:|...|..||                |..|:.:|
Zfish   230 ITPLTFIFICYLKIY-TRLQR----RNNMMERIRENKYRSS----------------ESKRINIM 273

  Fly   273 MVTIFLCFLVCFLPLMLANVVDD-----ERNTSYPWLHIIASVMAWASSVINPIIYAASNRNYSE 332
            :.:|.:.|.||:|||.:.|.|.|     ..|.::..|..:..:.|..|..|||:.|...|||:..
Zfish   274 LFSIVVAFAVCWLPLNVFNAVIDWNHEVAMNCTHNLLFSLCHLTAMCSVCINPVFYGFLNRNFQR 338

  Fly   333 SIFYFRV 339
            .:..||:
Zfish   339 DLRAFRL 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tmA_GPR84-like 37..341 CDD:320338 88/327 (27%)
TM helix 1 37..63 CDD:320338 8/25 (32%)
TM helix 2 71..94 CDD:320338 9/22 (41%)
TM helix 3 109..139 CDD:320338 10/29 (34%)
TM helix 4 153..171 CDD:320338 4/17 (24%)
TM helix 5 195..220 CDD:320338 8/28 (29%)
TM helix 6 264..294 CDD:320338 11/29 (38%)
TM helix 7 302..327 CDD:320338 7/24 (29%)
npy1rNP_001095861.1 7tmA_NPY1R 47..340 CDD:320517 86/321 (27%)
TM helix 1 48..74 CDD:320517 8/25 (32%)
TM helix 2 81..106 CDD:320517 10/24 (42%)
TM helix 3 119..149 CDD:320517 11/30 (37%)
TM helix 4 160..181 CDD:320517 5/20 (25%)
TM helix 5 217..246 CDD:320517 8/29 (28%)
TM helix 6 265..295 CDD:320517 12/45 (27%)
TM helix 7 308..333 CDD:320517 7/24 (29%)

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