DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and gpr84

DIOPT Version :9

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001072335.1 Gene:gpr84 / 779788 XenbaseID:XB-GENE-491098 Length:374 Species:Xenopus tropicalis


Alignment Length:392 Identity:95/392 - (24%)
Similarity:174/392 - (44%) Gaps:88/392 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DADMQMDEPAAATQSIYPHSATLFAAISACVFVTIGVLGNLITLLALLKSPTIREHATTAF---V 75
            |::....:|     ||..|  ..|......|...:|.:||::|:||.    .:.:...|.|   :
 Frog     5 DSNFSCYDP-----SIVEH--RYFGVTWGIVVSLVGTIGNVLTVLAY----ALDKKLQTRFNLLI 58

  Fly    76 ISLSISDLLFCSFSLPLTAVRFFQESWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIAC 140
            ::||::|:|:|:|..|.:...:....|..|||.|::|.::.:.:.:||:|::..|.::||||||.
 Frog    59 VNLSLADILYCTFLQPFSVDSYLHLYWRSGTTFCRVFGMLLFVSNSVSILNLCLIAVSRYILIAN 123

  Fly   141 HSRYSQIYKPKFITLQLLFVWAVSFLLLLPPILGIWGEMGLDEATFSCTILKKEGRSIKKTLFVI 205
            :..:.:|:....::|.||..|.:.|....|    :|....|.....:|:..:.:||.....|...
 Frog   124 NKLFDKIFCRLGVSLILLGTWVIGFASFAP----LWYVFVLVPKVCTCSFHRIKGRPYTTILMAF 184

  Fly   206 GFLLPCLVIIVSYSC--IYITVLHQKKK--IRNHDNFQIAA-------AKGSSSSGGGSYM---- 255
            .|       ::..||  ::..::|:|.|  .:..|.:::..       ..|.:|:..|.|.    
 Frog   185 YF-------VIGLSCVGVFYFLIHRKVKSAAQALDQYKLKTKNTTKENVSGINSTDVGKYQDMDS 242

  Fly   256 ----------------------TTTCTRKAREDNRL------------------TVMMVTIFLCF 280
                                  .:..|..|.::.:|                  |.|...:|:.|
 Frog   243 GVDTAVSSEVISEHLPSNKSTSQSAVTSHANDNEKLERRTLSQPKDSGSDFKKVTRMCFVVFIFF 307

  Fly   281 LVCFLPLMLANVVDDERNTSYPWLHIIASVMAWASSVINPIIYAASNRNYSESIFYFRVAYYKIF 345
            :|.::|.:|.|:. |.:|::...||:||:.:.|.:|.||||:|||.||.       ||.||.::.
 Frog   308 VVSYIPFLLLNIF-DAKNSAPQMLHMIAANLTWLNSCINPILYAAMNRQ-------FRDAYKRVI 364

  Fly   346 AL 347
            :|
 Frog   365 SL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tm_1 52..323 CDD:278431 77/328 (23%)
gpr84NP_001072335.1 7tm_4 27..>170 CDD:304433 42/150 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41370
Inparanoid 1 1.050 150 1.000 Inparanoid score I4265
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D321514at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48790
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.060

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