DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and aplnra

DIOPT Version :10

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001068573.1 Gene:aplnra / 561935 ZFINID:ZDB-GENE-060929-512 Length:362 Species:Danio rerio


Alignment Length:391 Identity:93/391 - (23%)
Similarity:161/391 - (41%) Gaps:81/391 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TGYFQDADMQMDEPAAATQSIYPHSATLFAAISACVFVTIGVLGNLITLLALLKSPTIREHATTA 73
            ||| .|:.....|        :..|.:|...:...:|: :|:.||.:.:..:.::.: :..|...
Zfish    16 TGY-NDSGCDYSE--------WEPSYSLIPVLYMLIFI-LGLSGNGVVIFTVWRAKS-KRRAADV 69

  Fly    74 FVISLSISDLLFCSFSLPLTAV-RFFQESWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYIL 137
            ::.:|:::||.|. .:|||.|| ......|.||..||||...:...|:..|:..:..::.:||:.
Zfish    70 YIGNLALADLTFV-ITLPLWAVYTALGYHWPFGVALCKISSYVVLVNMYASVFCLTCLSFDRYLA 133

  Fly   138 IACHSRYSQIYKPKFITLQLL-FVWAVSFLLLLPPIL--GIWGEMGLDEAT----FSCTILKKE- 194
            |. ||..|...:.:...|..| .:|.:|.||.:|.:|  ....:.|.:..|    ||...|.:: 
Zfish   134 IV-HSLSSGRLRSRATMLASLGAIWFLSCLLAVPTLLFRTTVDDTGSNRTTCAMDFSLVTLNQDH 197

  Fly   195 ------GRSIKKTLFVIGFLLPCLVIIVSYSCIYITVLHQKKKIRNHDNFQIAAAKGSSSSGGGS 253
                  |.|:..:  .:|||||.|.:.|.|..|..||......:|..|                 
Zfish   198 ESLWIAGLSLSSS--ALGFLLPFLAMTVCYCFIGCTVTRHFSHLRKED----------------- 243

  Fly   254 YMTTTCTRKAREDNRLTVMMVTIFLCFLVCFLPLMLANVVD-----DERNTSYPWLHII------ 307
                      ::..||..::.|:.:.|..|:.|..:...:|     |....|..:||.:      
Zfish   244 ----------QKKRRLLKIITTLVVVFAFCWTPFHVLKSMDALSYLDLAPNSCGFLHFLLLAHPY 298

  Fly   308 ASVMAWASSVINPIIYAASNRNYSESIFY---FRVAYYKIFALLKFWGEPLSPMPSRNYHQSKNS 369
            |:.:|:|:|.:||.:||          |:   ||.....:..|.|.....:|.|.|....|::.|
Zfish   299 ATCLAYANSCLNPFLYA----------FFDLRFRSQCLCLLNLKKAMHGHMSSMSSTLSAQTQKS 353

  Fly   370 K 370
            :
Zfish   354 E 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tmA_GPR84-like 37..341 CDD:320338 79/332 (24%)
TM helix 1 37..63 CDD:320338 4/25 (16%)
TM helix 2 71..94 CDD:320338 7/22 (32%)
TM helix 3 109..139 CDD:320338 7/29 (24%)
TM helix 4 153..171 CDD:320338 6/18 (33%)
TM helix 5 195..220 CDD:320338 10/24 (42%)
TM helix 6 264..294 CDD:320338 6/29 (21%)
TM helix 7 302..327 CDD:320338 10/30 (33%)
aplnraNP_001068573.1 TM helix 7 293..318 CDD:341340 9/34 (26%)
7tmA_Apelin_R 23..325 CDD:341340 82/352 (23%)
TM helix 1 34..60 CDD:341340 5/26 (19%)
TM helix 2 67..92 CDD:341340 9/25 (36%)
TM helix 3 105..135 CDD:341340 7/29 (24%)
TM helix 4 148..169 CDD:341340 7/20 (35%)
TM helix 5 202..231 CDD:341340 11/30 (37%)
TM helix 6 244..274 CDD:341340 6/29 (21%)

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