DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and mtnr1bb

DIOPT Version :9

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_571469.1 Gene:mtnr1bb / 30668 ZFINID:ZDB-GENE-990415-156 Length:347 Species:Danio rerio


Alignment Length:347 Identity:95/347 - (27%)
Similarity:164/347 - (47%) Gaps:50/347 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SACVFVT-IGVLGNLITLLALLKSPTIREHATTAFVISLSISDLLFCSFSLPLTAVRFFQESWTF 104
            |..:|.| :.|||||:.::::.::..:| :|...||:||:.:||:...:..||.....|.:.|:.
Zfish    36 SVLIFTTVVDVLGNLLVIISVFRNRKLR-NAGNVFVVSLAFADLVVAFYPYPLVLYAIFHDGWSL 99

  Fly   105 GTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHS-RYSQIYKPKFITLQLLFVWAVSFLLL 168
            |.|.|||...:...:|..|:.::.||.:|||..| ||| .|.::|..:...|.:..:||::.|.:
Zfish   100 GETQCKISGFLMGLSVIGSVFNITGIAINRYCYI-CHSFAYGRLYSFRNTLLLVALIWALTVLAI 163

  Fly   169 LPPILGIWGEMGLDEATFSCTILKKEGRSIKKTLFVIGFLLPCLVIIVSYSCIYITVLHQKKKIR 233
            ||..  ..|.:..|...:|||..:....|....:.|:.||:|..|:...|..|::.|:..::|::
Zfish   164 LPNF--FVGSLSYDPRVYSCTFTQTASSSYTVVVVVVHFLVPIAVVTFCYLRIWVLVIQVRRKVK 226

  Fly   234 NHDNFQIAAAKGSSSSGGGSYMTTTCTRKAREDNRLTVMMVTIFLCFLVCFLPLMLANVV----D 294
            :.:.                      :|....|.|..|.|..:|:.|.:|:.||.|..:|    .
Zfish   227 SEER----------------------SRVRPSDLRNFVTMFVVFVLFAICWAPLNLIGLVVAINP 269

  Fly   295 DERNTSYP-WLHIIASVMAWASSVINPIIYAASNRNYSESIFYFRVAYYKIFALLKFWGEPLSPM 358
            :......| ||.:::..||:.:|.:|.|||...|||       ||..|.:|...:  |      :
Zfish   270 EVMAPRVPEWLFVVSYFMAYFNSCLNAIIYGLLNRN-------FRKEYVRIMTAV--W------I 319

  Fly   359 PSRNYHQSKNSKELSGVIRSTP 380
            |.|  ..::.|:..:..:||.|
Zfish   320 PRR--FVTETSRAATDGMRSKP 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tm_1 52..323 CDD:278431 74/276 (27%)
mtnr1bbNP_571469.1 7tm_4 39..>241 CDD:304433 61/227 (27%)
7tm_1 48..299 CDD:278431 74/276 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I5631
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I4532
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26597
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24228
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4597
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.090

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