DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and mtnr1c

DIOPT Version :9

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001154956.1 Gene:mtnr1c / 30661 ZFINID:ZDB-GENE-990415-158 Length:361 Species:Danio rerio


Alignment Length:325 Identity:90/325 - (27%)
Similarity:155/325 - (47%) Gaps:45/325 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QSIYPHSATLFAAISACVFVTIG-VLGNLITLLALLKSPTIREHATTAFVISLSISDLLFCSFSL 90
            :|..|..|...|.:  .:|.|:. ::|||:.:|::.::..:| :|...||:|||::||:...:..
Zfish    24 RSTSPGVAATLAGV--LIFTTVADIVGNLLVILSVYRNKKLR-NAGNIFVVSLSVADLVVALYPY 85

  Fly    91 PLTAVRFFQESWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHS-RYSQIYKPKFIT 154
            ||..:..|...||.|:..|::...|...:|..|:.::..|.:|||..| ||| ||.::|..:...
Zfish    86 PLALIAIFHNDWTMGSLHCQLSGFIMGLSVIGSVFNITAIAINRYCYI-CHSLRYDRLYSRRNTC 149

  Fly   155 LQLLFVWAVSFLLLLPPILGIWGEMGLDEATFSCTILKKEGRSIKKTLFVIGFLLPCLVIIVSYS 219
            |.||..|.::.|..:|..|  .|.:..|...||||..:....|....:.:|.||:|..|:...|.
Zfish   150 LYLLLTWMLTALATVPNFL--VGSLKYDPRVFSCTFTQTASSSYTVCVVLIHFLVPLGVVSFCYL 212

  Fly   220 CIYITVLHQKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAREDNRLTVMMVTIFLCFLVCF 284
            .|:..|:..|.::|  .|.::.||                      |.|..:.|..:|:.|.||:
Zfish   213 RIWTLVIRVKGRVR--PNPKVRAA----------------------DLRNFLTMFVVFVLFAVCW 253

  Fly   285 LPLM---LANVVDDER-NTSYP-WLHIIASVMAWASSVINPIIYAASNRNYSESIFYFRVAYYKI 344
            .||.   ||..::..: ..:.| ||.:.:..||:.:|.:|.::|...|:|:.:.        ||:
Zfish   254 APLNFIGLAVAINPAKVAPNIPEWLFVTSYFMAYFNSCLNAVVYGLLNQNFRQE--------YKL 310

  Fly   345  344
            Zfish   311  310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tm_1 52..323 CDD:278431 79/276 (29%)
mtnr1cNP_001154956.1 7tm_4 39..>186 CDD:304433 49/150 (33%)
7tm_1 48..297 CDD:278431 79/276 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I5631
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D321514at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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