DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and Npy1r

DIOPT Version :10

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001106828.1 Gene:Npy1r / 29358 RGDID:3198 Length:382 Species:Rattus norvegicus


Alignment Length:336 Identity:89/336 - (26%)
Similarity:147/336 - (43%) Gaps:71/336 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ATLFA-AISACVFVTIGVLGNLITLLALLKSPTIREHATTAFVISLSISDLLFCSFSLPLTAVRF 97
            |.:|. |::....:.:||.|||..::.:||...:| :.|...:::||.||||.....||.|.|..
  Rat    37 AVIFTLALAYGAVIILGVSGNLALIIIILKQKEMR-NVTNILIVNLSFSDLLVAVMCLPFTFVYT 100

  Fly    98 FQESWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHSRYSQIYKPKFITLQLLFVWA 162
            ..:.|.||.|:||:.|.:...::.||:.|:|.|.:.|:.||.....:....:..:|.:.:::|.|
  Rat   101 LMDHWVFGETMCKLNPFVQCVSITVSIFSLVLIAVERHQLIINPRGWRPNNRHAYIGITVIWVLA 165

  Fly   163 VSF--------LLLLPPILGI-----------WGEMGLDEATFSCTILKKEGRSIKKTLFVIGFL 208
            |:.        :|...|...:           :.:...|....|.|.|          |.|:.:.
  Rat   166 VASSLPFVIYQILTDEPFQNVSLAAFKDKYVCFDKFPSDSHRLSYTTL----------LLVLQYF 220

  Fly   209 LPCLVIIVSYSCIYITVLHQKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAREDNRLTVMM 273
            .|...|.:.|..||:     :.|.||:...:|..:|..||                |..|:.||:
  Rat   221 GPLCFIFICYFKIYV-----RLKRRNNMMDKIRDSKYRSS----------------ETKRINVML 264

  Fly   274 VTIFLCFLVCFLPLMLANVVDDERNTSYPWLH-IIAS-----------VMAWASSVINPIIYAAS 326
            ::|.:.|.||:|||.:.|.|.|       |.| |||:           :.|..|:.:|||.|...
  Rat   265 LSIVVAFAVCWLPLTIFNTVFD-------WNHQIIATCNHNLLFLLCHLTAMISTCVNPIFYGFL 322

  Fly   327 NRNYSESIFYF 337
            |:|:...:.:|
  Rat   323 NKNFQRDLQFF 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tmA_GPR84-like 37..341 CDD:320338 88/333 (26%)
TM helix 1 37..63 CDD:320338 8/26 (31%)
TM helix 2 71..94 CDD:320338 9/22 (41%)
TM helix 3 109..139 CDD:320338 10/29 (34%)
TM helix 4 153..171 CDD:320338 5/25 (20%)
TM helix 5 195..220 CDD:320338 5/24 (21%)
TM helix 6 264..294 CDD:320338 12/29 (41%)
TM helix 7 302..327 CDD:320338 11/36 (31%)
Npy1rNP_001106828.1 7tmA_NPY1R 40..330 CDD:320517 87/328 (27%)
TM helix 1 41..67 CDD:320517 7/25 (28%)
TM helix 2 74..99 CDD:320517 10/24 (42%)
TM helix 3 112..142 CDD:320517 10/29 (34%)
TM helix 4 153..174 CDD:320517 4/20 (20%)
TM helix 5 207..236 CDD:320517 10/43 (23%)
TM helix 6 255..285 CDD:320517 13/45 (29%)
TM helix 7 298..323 CDD:320517 6/24 (25%)

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