DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and Gpr15

DIOPT Version :9

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001099360.1 Gene:Gpr15 / 288181 RGDID:1306639 Length:360 Species:Rattus norvegicus


Alignment Length:311 Identity:69/311 - (22%)
Similarity:127/311 - (40%) Gaps:46/311 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TQSIYPHSATLFAAISACVFVTIGVLGNLITLLALLKSPTIREHATTAFVISLSISDLLFCSFSL 90
            |.|...:::.........||:| |||||.| |:..|............|:|:|:.||.:|. .:|
  Rat    25 TPSHTSYTSVFLPVFYTAVFLT-GVLGNFI-LMVTLHFKHRNRRLIDIFIINLAASDFIFL-VTL 86

  Fly    91 PLTAVRFFQES---WTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHSRYSQIYKPKF 152
            ||...:  :.|   |..|:.|||........|:..::..:..::::||:.|...:...::.:...
  Rat    87 PLWVDK--EASLGLWRTGSLLCKGSSYTISVNMHCNVFLLTCMSMDRYLAIMRPTLARRLRRRSC 149

  Fly   153 ITLQLLFVWAVSFLLLLPPILGIWGEMGLDEATFSCTILKKEGRSIK----KTLFVIGFLLPCLV 213
            .......:|.:|.||.||.:|    ..||..........:|:..|:|    ....:..|.:|.|.
  Rat   150 AYAVCAVIWIISCLLGLPTLL----SRGLTHIEGKPYCAEKKPTSLKLMWGLVALIATFFVPLLS 210

  Fly   214 IIVSYSCIYITVLHQKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAREDNRLTVMMVTIFL 278
            |:.||.||...:....::...|:                        :|.|:..::.|::|..|.
  Rat   211 IVSSYCCITRRLCAHYQQSGKHN------------------------KKLRKSIKIIVIVVAAFT 251

  Fly   279 CFLVCFLPLMLANVVDD-ERNTSYPWLHI-----IASVMAWASSVINPIIY 323
            ...|.|..:.|..:|.. :..:.:|...:     :...:|:|:|.:||::|
  Rat   252 ISWVPFNTVKLLAIVSGLQPESQFPSESLQQAMKVTGSLAFANSCVNPLLY 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tm_1 52..323 CDD:278431 60/283 (21%)
Gpr15NP_001099360.1 7tm_GPCRs 34..313 CDD:421689 67/302 (22%)
TM helix 1 35..61 CDD:410628 11/27 (41%)
TM helix 2 68..93 CDD:410628 9/27 (33%)
TM helix 3 106..136 CDD:410628 5/29 (17%)
TM helix 4 150..168 CDD:410628 5/17 (29%)
TM helix 5 192..221 CDD:410628 9/28 (32%)
TM helix 6 234..264 CDD:410628 8/29 (28%)
TM helix 7 281..306 CDD:410628 6/22 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24228
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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