DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and Bdkrb2

DIOPT Version :9

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001257642.1 Gene:Bdkrb2 / 25245 RGDID:2201 Length:398 Species:Rattus norvegicus


Alignment Length:314 Identity:58/314 - (18%)
Similarity:134/314 - (42%) Gaps:77/314 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LITLLALLKSPTIRE----HATTAFVISLSISDL----LFCSFSLPLTAVRFFQE-SWTFGTTLC 109
            ::.|||.|::..:..    |.|...|..:.:.:|    |..:..||..|:..... .|.||..||
  Rat    73 VLFLLAALENIFVLSVFCLHKTNCTVAEIYLGNLAAADLILACGLPFWAITIANNFDWLFGEVLC 137

  Fly   110 KIFPVIFYGNVAVSLLSMVGITLNRYILIACHSRYSQIYKPKFITLQLLFVWAVSFLLLLPPILG 174
            ::...:.|.|:..|:..::.::::||:.:.......::...::..|..|.:|:.: |||..|:| 
  Rat   138 RVVNTMIYMNLYSSICFLMLVSIDRYLALVKTMSMGRMRGVRWAKLYSLVIWSCT-LLLSSPML- 200

  Fly   175 IWGEMGLDEATFSCTILKKEGRSIKKTLFV----------------IGFLLPCLVIIVSYSCIYI 223
            ::..|         ...::||.::...:.|                :|||||  :.|:::..:.|
  Rat   201 VFRTM---------KDYREEGHNVTACVIVYPSRSWEVFTNMLLNLVGFLLP--LSIITFCTVRI 254

  Fly   224 TVLHQKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAREDNRLTVMMVTIFLCFLVCFLPLM 288
                 .:.:||::..:.                    ::.:.:.:.||:::.:...|::|:.|..
  Rat   255 -----MQVLRNNEMKKF--------------------KEVQTEKKATVLVLAVLGLFVLCWFPFQ 294

  Fly   289 LANVVD------------DERNTSYPWLHIIASVMAWASSVINPIIYAASNRNY 330
            ::..:|            :||....  :..|:|.:|:::|.:||::|....:.:
  Rat   295 ISTFLDTLLRLGVLSGCWNERAVDI--VTQISSYVAYSNSCLNPLVYVIVGKRF 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tm_1 52..323 CDD:278431 57/305 (19%)
Bdkrb2NP_001257642.1 7tmA_BK-2 66..350 CDD:320503 58/314 (18%)
TM helix 1 67..91 CDD:320503 4/17 (24%)
TM helix 2 100..121 CDD:320503 4/20 (20%)
TM helix 3 138..160 CDD:320503 3/21 (14%)
TM helix 4 183..199 CDD:320503 6/16 (38%)
TM helix 5 229..252 CDD:320503 6/24 (25%)
TM helix 6 276..298 CDD:320503 5/21 (24%)
TM helix 7 318..343 CDD:320503 7/26 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24228
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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