DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and Mtnr1b

DIOPT Version :10

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_663758.2 Gene:Mtnr1b / 244701 MGIID:2181726 Length:364 Species:Mus musculus


Alignment Length:327 Identity:90/327 - (27%)
Similarity:149/327 - (45%) Gaps:57/327 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ISACVFVTIGV--LGNLITLLALLKSPTIREHATTAFVISLSISDLLFCSFSLPLTAVRFFQESW 102
            :|..|.||..|  :|||:.:|::|::..:| :|...||:||:::||:...:..||..|...::.|
Mouse    43 LSTVVVVTTAVDFVGNLLVILSVLRNRKLR-NAGNLFVVSLALADLVIALYPYPLILVAIIRDGW 106

  Fly   103 TFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHS-RYSQI----YKPKFITLQLLFVWA 162
            ..|...||....:...:|..|:.::..|.:|||..| ||| .|.::    |.|.:|:|    ||.
Mouse   107 VLGEAHCKASAFVMGLSVIGSVFNITAIAINRYCCI-CHSTTYHRVCSHWYTPIYISL----VWL 166

  Fly   163 VSFLLLLPPILGIWGEMGLDEATFSCTILKKEGRSIKKTLFVIGFLLPCLVIIVSYSCIYITVLH 227
            ::.:.|:|..  ..|.:..|...:|||.::.........:..|.||||..|:...|..|::.||.
Mouse   167 LTLVALVPNF--FVGSLEYDPRIYSCTFIQTASTQYTAAVVAIHFLLPMAVVSFCYLRIWVLVLQ 229

  Fly   228 QKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAR---EDNRLTVMMVTIFLCFLVCFLPLM- 288
            .::|.:                         ..||.|   .|.|..:.|..:|:.|.:|:.||. 
Mouse   230 ARRKAK-------------------------AERKLRLRPSDLRSFLTMFAVFVVFAICWAPLNC 269

  Fly   289 --LANVVDDERNT-SYP-WLHIIASVMAWASSVINPIIYAASNRNYSESIFYFRVAYYKIFALLK 349
              ||..::.|... ..| .|.:.:..:|:.:|.:|.|:|...|:|       ||..|.:|  ||.
Mouse   270 IGLAVAINPEAMALQVPEGLFVTSYFLAYFNSCLNAIVYGLLNQN-------FRREYKRI--LLA 325

  Fly   350 FW 351
            .|
Mouse   326 IW 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tmA_GPR84-like 37..341 CDD:320338 85/315 (27%)
TM helix 1 37..63 CDD:320338 10/24 (42%)
TM helix 2 71..94 CDD:320338 8/22 (36%)
TM helix 3 109..139 CDD:320338 8/29 (28%)
TM helix 4 153..171 CDD:320338 5/17 (29%)
TM helix 5 195..220 CDD:320338 7/24 (29%)
TM helix 6 264..294 CDD:320338 11/35 (31%)
TM helix 7 302..327 CDD:320338 7/25 (28%)
Mtnr1bNP_663758.2 7tm_GPCRs 41..319 CDD:475119 85/315 (27%)
TM helix 1 43..67 CDD:410628 9/23 (39%)
TM helix 2 76..98 CDD:410628 8/21 (38%)
TM helix 3 114..136 CDD:410628 4/21 (19%)
TM helix 4 159..175 CDD:410628 5/19 (26%)
TM helix 5 198..221 CDD:410628 6/22 (27%)
TM helix 6 250..272 CDD:410628 6/21 (29%)
TM helix 7 287..312 CDD:410628 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..364
Blue background indicates that the domain is not in the aligned region.

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