DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and Agtr2

DIOPT Version :10

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_036626.1 Gene:Agtr2 / 24182 RGDID:2072 Length:363 Species:Rattus norvegicus


Alignment Length:339 Identity:70/339 - (20%)
Similarity:133/339 - (39%) Gaps:100/339 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VFVTIGVLGNL--ITLLALLKSPTIREHATTAFVISLSISDLLFCSFSLPLTAVRF-FQESWTFG 105
            :|| ||...|:  ::|....|.|   :..::.::.:|:::|||..: :|||.|..: ::..|.||
  Rat    54 IFV-IGFAVNIVVVSLFCCQKGP---KKVSSIYIFNLAVADLLLLA-TLPLWATYYSYRYDWLFG 113

  Fly   106 TTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHSRYSQIYKPKFITLQLLFVWAVSFLLLLP 170
            ..:||:|......|:..|:..:..::::||..: .:...||...|...:..:..||.::.|..||
  Rat   114 PVMCKVFGSFLTLNMFASIFFITCMSVDRYQSV-IYPFLSQRRNPWQASYVVPLVWCMACLSSLP 177

  Fly   171 PI----------LGI--------------WGEMGLDEATFSCTILKKEGRSIKKTLFVIGFLLPC 211
            ..          ||:              |                ..|.::.|.  ::||::|.
  Rat   178 TFYFRDVRTIEYLGVNACIMAFPPEKYAQW----------------SAGIALMKN--ILGFIIPL 224

  Fly   212 LVIIVSYSCIYITVLHQKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAREDNRLTVMMVTI 276
            :.|...|..|      :|..::.:                 ||.....||     :::..|...:
  Rat   225 IFIATCYFGI------RKHLLKTN-----------------SYGKNRITR-----DQVLKMAAAV 261

  Fly   277 FLCFLVCFLPLMLANVVDDERNTSYPWLHII---------------ASVMAWASSVINPIIYA-A 325
            .|.|::|:||..:...:|     :..|:.||               |.::.:.:|.:||.:|. .
  Rat   262 VLAFIICWLPFHVLTFLD-----ALTWMGIINSCEVIAVIDLALPFAILLGFTNSCVNPFLYCFV 321

  Fly   326 SNRNYSESIFYFRV 339
            .||...:....|||
  Rat   322 GNRFQQKLRSVFRV 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tmA_GPR84-like 37..341 CDD:320338 70/339 (21%)
TM helix 1 37..63 CDD:320338 6/20 (30%)
TM helix 2 71..94 CDD:320338 7/22 (32%)
TM helix 3 109..139 CDD:320338 7/29 (24%)
TM helix 4 153..171 CDD:320338 4/17 (24%)
TM helix 5 195..220 CDD:320338 7/24 (29%)
TM helix 6 264..294 CDD:320338 6/29 (21%)
TM helix 7 302..327 CDD:320338 8/40 (20%)
Agtr2NP_036626.1 7tmA_AT2R 45..329 CDD:341341 67/331 (20%)
TM helix 1 46..72 CDD:341341 6/18 (33%)
TM helix 2 79..104 CDD:341341 8/25 (32%)
TM helix 3 117..147 CDD:341341 7/30 (23%)
TM helix 4 158..182 CDD:341341 5/23 (22%)
TM helix 5 208..237 CDD:341341 8/36 (22%)
TM helix 6 249..279 CDD:341341 8/34 (24%)
TM helix 7 297..322 CDD:341341 5/24 (21%)
Helix VIII. /evidence=ECO:0000250|UniProtKB:P50052 324..333 1/8 (13%)

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