DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tre1 and Gpr75

DIOPT Version :9

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_780699.2 Gene:Gpr75 / 237716 MGIID:2441843 Length:540 Species:Mus musculus


Alignment Length:485 Identity:105/485 - (21%)
Similarity:172/485 - (35%) Gaps:154/485 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HSATLFAAISACVFV-----TIGVLGNLITLLALLKSPTIREHATT--AFVISLSISDLLFCSFS 89
            |:|||.    .|.|:     .:|..||.|..|:.. .|:.|:..|.  ..:::||..||..|..:
Mouse    38 HTATLV----TCTFLLAIIFCLGSYGNFIVFLSFF-DPSFRKFRTNFDFMILNLSFCDLFICGVT 97

  Fly    90 LPL-TAVRFFQESWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIA-----CHSRYSQIY 148
            .|: |.|.||..:.:...:.|..|.:...|.|.:||..:..|.|:|..::.     |.:.:|   
Mouse    98 APMFTFVLFFSSASSIPDSFCFTFHLTSSGFVIMSLKMVAVIALHRLRMVMGKQPNCTASFS--- 159

  Fly   149 KPKFITLQLLFVWAVSFLLLLPPILGIWGEMGLDEATFS---------C----TILKKEGRSIKK 200
               .|.|..|.:||.||.|                ||.:         |    :::..||::| .
Mouse   160 ---CILLLTLLLWATSFTL----------------ATLATLRTNKSHLCLPMSSLMDGEGKAI-L 204

  Fly   201 TLFVIGFLLPCLVIIVSYSCIYITVLH--QKKK---IRNHDNFQIAAAKGSSSSGGGSYMTTTCT 260
            :|:|:.|.....|:.|||..|..|:..  |.||   :...|..:.....|:|..|.|.  ...||
Mouse   205 SLYVVDFTFCVAVVSVSYIMIAQTLRKNAQVKKCPPVITVDASRPQPFMGASVKGNGD--PIQCT 267

  Fly   261 RKA-------------------------------------------REDNRLTVMMVTIFLCFLV 282
            ..|                                           .:|::..|..|.|.|..||
Mouse   268 MPALYRNQNYNKLQHSQTHGYTKNINQMPIPSASRLQLVSAINFSTAKDSKAVVTCVVIVLSVLV 332

  Fly   283 CFLPL---MLANVVDDERNTSYPWLHIIASVMAWASSVINPIIYAASNRNYSESIF----YFRVA 340
            |.|||   ::..|:.|..:.......:....:.:..|.:||.||:.::......:.    |..:.
Mouse   333 CCLPLGISLVQMVLSDNGSFILYQFELFGFTLIFFKSGLNPFIYSRNSAGLRRKVLWCLRYTGLG 397

  Fly   341 YY--KIFALLKFWGE-------------------PLSPMPSRNY----------HQSKNSKELS- 373
            :.  |....|:..|:                   .|||.|.|.:          .:|..|.::| 
Mouse   398 FLCCKQKTRLRAMGKGNLEINRNKSSHHETNSAYMLSPKPQRKFVDQACGPSHSKESAASPKVSA 462

  Fly   374 -----GVIRSTPL------FHAVQKNSINQ 392
                 |...|||:      ::::..:|.:|
Mouse   463 GHQPCGQSSSTPINTRIEPYYSIYNSSPSQ 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tm_1 52..323 CDD:278431 78/342 (23%)
Gpr75NP_780699.2 7tmA_GPR75 44..387 CDD:320136 83/368 (23%)
TM helix 1 44..70 CDD:320136 7/26 (27%)
TM helix 2 79..104 CDD:320136 7/24 (29%)
TM helix 3 118..148 CDD:320136 9/29 (31%)
TM helix 4 159..181 CDD:320136 11/43 (26%)
TM helix 5 199..228 CDD:320136 11/29 (38%)
TM helix 6 314..344 CDD:320136 11/29 (38%)
TM helix 7 355..380 CDD:320136 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..475 6/31 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24228
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.