DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and Mtnr1b

DIOPT Version :9

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001380770.1 Gene:Mtnr1b / 192646 RGDID:620798 Length:364 Species:Rattus norvegicus


Alignment Length:364 Identity:93/364 - (25%)
Similarity:160/364 - (43%) Gaps:66/364 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PHSATLFAAISACVFVTIGV--LGNLITLLALLKSPTIREHATTAFVISLSISDLLFCSFSLPLT 93
            |.:..:...:|..|.||..|  :|||:.:|::|::..:| :|...||::|:::||:...:..||.
  Rat    34 PRAPWVAPMLSTVVIVTTAVDFVGNLLVILSVLRNRKLR-NAGNLFVVNLALADLVVALYPYPLI 97

  Fly    94 AVRFFQESWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHS-----RYSQIYKPKFI 153
            .|....:.|..|...||....:...:|..|:.::..|.:|||..| |||     ..||.:.|.:|
  Rat    98 LVAILHDGWVLGEIHCKASAFVMGLSVIGSVFNITAIAINRYWCI-CHSATYHRACSQWHAPLYI 161

  Fly   154 TLQLLFVWAVSFLLLLPPILGIWGEMGLDEATFSCTILKKEGRSIKKTLFVIGFLLPCLVIIVSY 218
            :|    :|.::.:.|:|..  ..|.:..|...:|||.::.........:..|.||||..|:...|
  Rat   162 SL----IWLLTLVALVPNF--FVGSLEYDPRIYSCTFIQTASTQYTMAVVAIHFLLPIAVVSFCY 220

  Fly   219 SCIYITVLHQKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAR---EDNRLTVMMVTIFLCF 280
            ..|:|.||..::|.:                         ..||.|   .|.|..:.|..:|:.|
  Rat   221 LRIWILVLQARRKAK-------------------------AERKLRLRPSDLRSFLTMFAVFVVF 260

  Fly   281 LVCFLPLM---LANVVDDERNT-SYP-WLHIIASVMAWASSVINPIIYAASNRNYSESIFYFRVA 340
            .:|:.||.   ||..::.|... ..| .|.:.:..:|:.:|.:|.|:|...|:|       ||..
  Rat   261 AICWAPLNCIGLAVAINPEAMALQIPEGLFVTSYFLAYFNSCLNAIVYGLLNQN-------FRRE 318

  Fly   341 YYKIFALLKFWGEPLSPMPSRNYHQSKN---SKELSGVI 376
            |.:|.:.|  |.      ..|.:|.:..   :::|.|.:
  Rat   319 YKRILSAL--WS------TGRCFHDASKCHLTEDLQGPV 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tm_1 52..323 CDD:278431 74/283 (26%)
Mtnr1bNP_001380770.1 7tm_GPCRs 41..319 CDD:421689 84/317 (26%)
TM helix 1 42..68 CDD:410628 10/25 (40%)
TM helix 2 75..100 CDD:410628 7/24 (29%)
TM helix 3 113..143 CDD:410628 9/30 (30%)
TM helix 4 155..177 CDD:410628 6/27 (22%)
TM helix 5 197..226 CDD:410628 8/28 (29%)
TM helix 6 244..274 CDD:410628 9/29 (31%)
TM helix 7 287..312 CDD:410628 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24228
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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