DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tre1 and Bdkrb2

DIOPT Version :10

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_011242293.1 Gene:Bdkrb2 / 12062 MGIID:102845 Length:406 Species:Mus musculus


Alignment Length:361 Identity:72/361 - (19%)
Similarity:154/361 - (42%) Gaps:78/361 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VFVTIGVLGNLITLLALL---KSPTIREHATTAFVISLSISDLLFCSFSLPLTAVRFFQE-SWTF 104
            |...:..|.||..|....   .|.|:.|    .::.:|:.:||:. :..||..|:..... .|.|
Mouse    81 VLFLLAALENLFVLSVFFLHKNSCTVAE----IYLGNLAAADLIL-ACGLPFWAITIANNFDWVF 140

  Fly   105 GTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACHSRYSQIYKPKFITLQLLFVWAVSFLLLL 169
            |..||::...:.|.|:..|:..::.::::||:.:.......::...::..|..|.:|..:.||..
Mouse   141 GEVLCRVVNTMIYMNLYSSICFLMLVSIDRYLALVKTMSMGRMRGVRWAKLYSLVIWGCTLLLSS 205

  Fly   170 PPI----LGIWGEMGLDEATFSCTILKKEGRS----IKKTLFVIGFLLPCLVIIVSYSCIYITVL 226
            |.:    :..:.|.|  ....:|.|: ...||    ....|.::|||||  :.::::..:.|.  
Mouse   206 PMLVFRTMREYSEEG--HNVTACVIV-YPSRSWEVFTNVLLNLVGFLLP--LSVITFCTVRIL-- 263

  Fly   227 HQKKKIRNHDNFQIAAAKGSSSSGGGSYMTTTCTRKAREDNRLTVMMVTIFLCFLVCFLPLMLAN 291
               :.:||::..:.                    ::.:.:.:.||:::.:...|::|::|..::.
Mouse   264 ---QVLRNNEMKKF--------------------KEVQTERKATVLVLAVLGLFVLCWVPFQIST 305

  Fly   292 VVD------------DERNTSYPWLHIIASVMAWASSVINPIIYAASNRNY-SESIFYFRVAYYK 343
            .:|            ||.....  :..|:|.:|:::|.:||::|....:.: .:|...:||...|
Mouse   306 FLDTLLRLGVLSGCWDEHAVDV--ITQISSYVAYSNSGLNPLVYVIVGKRFRKKSREVYRVLCQK 368

  Fly   344 IFALLKFWGEPLSPMPSRNYHQSKNSKELSGVIRST 379
            ...:    |||:         |.:||   .|.:|::
Mouse   369 GGCM----GEPV---------QMENS---MGTLRTS 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tmA_GPR84-like 37..341 CDD:320338 63/321 (20%)
TM helix 1 37..63 CDD:320338 5/21 (24%)
TM helix 2 71..94 CDD:320338 5/22 (23%)
TM helix 3 109..139 CDD:320338 6/29 (21%)
TM helix 4 153..171 CDD:320338 5/17 (29%)
TM helix 5 195..220 CDD:320338 8/28 (29%)
TM helix 6 264..294 CDD:320338 5/29 (17%)
TM helix 7 302..327 CDD:320338 7/24 (29%)
Bdkrb2XP_011242293.1 7tmA_BK-2 74..358 CDD:320503 60/313 (19%)
TM helix 1 74..100 CDD:320503 5/18 (28%)
TM helix 2 107..132 CDD:320503 7/29 (24%)
TM helix 3 145..175 CDD:320503 6/29 (21%)
TM helix 4 188..209 CDD:320503 6/20 (30%)
TM helix 5 236..265 CDD:320503 7/35 (20%)
TM helix 6 278..308 CDD:320503 5/29 (17%)
TM helix 7 326..351 CDD:320503 7/26 (27%)

Return to query results.
Submit another query.