DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tre1 and Agtr1b

DIOPT Version :10

Sequence 1:NP_001284901.1 Gene:Tre1 / 140439 FlyBaseID:FBgn0046687 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_780295.2 Gene:Agtr1b / 11608 MGIID:87965 Length:359 Species:Mus musculus


Alignment Length:389 Identity:90/389 - (23%)
Similarity:164/389 - (42%) Gaps:93/389 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 MQMDEPAAATQS-IYPHSATLFAAISACVFVTIGVLGNLITLLAL---LKSPTIREHATTAFVIS 77
            :|.|.|.|...: |:....||::.|    || :|:.||.:.::.:   :|..|:    .:.|:::
Mouse    14 IQDDCPKAGRHNYIFVMIPTLYSII----FV-VGIFGNSLVVIVIYFYMKLKTV----ASVFLLN 69

  Fly    78 LSISDLLFCSFSLPLTAVRFFQE-SWTFGTTLCKIFPVIFYGNVAVSLLSMVGITLNRYILIACH 141
            |:::||.|. .:|||.||....| .|.||..||||.......|:..|:..:..::::||:.|. |
Mouse    70 LALADLCFL-LTLPLWAVYTAMEYQWPFGNHLCKIASASVSFNLYASVFLLTCLSIDRYLAIV-H 132

  Fly   142 SRYSQIYKPKFIT-LQLLFVWAVSFLLLLPPILGIWGEMGLDEATFSCTILKKEGRSIKKTL--- 202
            ...|::.:...:. :..:.:|.::.|..||.:  |...:...|.| :.|:......|...||   
Mouse   133 PMKSRLRRTMLVAKVTCIIIWLMAGLASLPAV--IHRNVYFIENT-NITVCAFHYESQNSTLPIG 194

  Fly   203 -----FVIGFLLPCLVIIVSYSCIYITVLH----QKKKIRNHDNFQIAAAKGSSSSGGGSYMTTT 258
                 .::||:.|.::|:.||:.|:..:..    ||...||.|.|:|                  
Mouse   195 LGLTKNILGFVFPFVIILTSYTLIWKALKKAYKIQKNTPRNDDIFRI------------------ 241

  Fly   259 CTRKAREDNRLTVMMVTIFLCF------LVCFLPLM----------LANVVDDERNTSYPWLHII 307
                        :|.:.:|..|      :..||.::          :|:|||    |:.|    |
Mouse   242 ------------IMAIVLFFFFSWVPHQIFSFLDVLIQLGVIHDCEIADVVD----TAMP----I 286

  Fly   308 ASVMAWASSVINPIIYAASNRNYSESIFYFRVAYY-----KIFALLKFWGEPLSPMPSRNYHQS 366
            ...:|:.::.:||:.|....:.:..  ::.::..|     :..|.|......||..||.|...|
Mouse   287 TICIAYFNNCLNPLFYGFLGKKFKR--YFLQLLKYIPPKARSHAGLSTKMSTLSYRPSDNMSSS 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tre1NP_001284901.1 7tmA_GPR84-like 37..341 CDD:320338 74/336 (22%)
TM helix 1 37..63 CDD:320338 6/28 (21%)
TM helix 2 71..94 CDD:320338 8/22 (36%)
TM helix 3 109..139 CDD:320338 7/29 (24%)
TM helix 4 153..171 CDD:320338 3/18 (17%)
TM helix 5 195..220 CDD:320338 9/32 (28%)
TM helix 6 264..294 CDD:320338 7/45 (16%)
TM helix 7 302..327 CDD:320338 6/24 (25%)
Agtr1bNP_780295.2 7tmA_AT1R 29..313 CDD:320320 76/337 (23%)
TM helix 1 30..56 CDD:320320 8/30 (27%)
TM helix 2 63..88 CDD:320320 10/25 (40%)
TM helix 3 101..131 CDD:320320 7/29 (24%)
TM helix 4 144..165 CDD:320320 4/22 (18%)
TM helix 5 192..221 CDD:320320 7/28 (25%)
TM helix 6 233..263 CDD:320320 9/59 (15%)
TM helix 7 281..306 CDD:320320 8/32 (25%)

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