DRSC/TRiP Functional Genomics Resources

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Protein Alignment TCP10L and Tcp10b

DIOPT Version :10

Sequence 1:NP_653260.1 Gene:TCP10L / 140290 HGNCID:11657 Length:215 Species:Homo sapiens
Sequence 2:XP_008756981.1 Gene:Tcp10b / 308169 RGDID:1307454 Length:515 Species:Rattus norvegicus


Alignment Length:201 Identity:64/201 - (31%)
Similarity:96/201 - (47%) Gaps:16/201 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    18 EDPCPGAGA---VMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQELGRQKSLWADVHGKLRSHI 79
            ||...|.|.   ..:|....|:...||..|.|:..||:||..|..||.||.|.|...|..|:|.|
  Rat     3 EDQSQGGGGPNNEKKKMEAKAQAPGEDSKTDEVVGLQKQISDLGTELTRQSSWWCVAHKDLQSQI 67

Human    80 DALREQNMELREKLRALQLQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEE-TIP-KY 142
            |||.::|.|:|.:|:.|:.|..:|.|...|||.....::|| ::..| .|:.::|.|. |:| ::
  Rat    68 DALIKENQEIRAELQTLKKQDSEAPKAPTASPSPPTATNTL-VQQIF-CITEIAAYEGCTLPCRH 130

Human   143 AGH--KNQSATLLGQRSSSNNSAPPKPMSLKIERISSWKTPPQENRDKNLSRRRQDRRATPTGRP 205
            :.|  ..:..|::       |.....|:.::||.:.|.||...:.||...|...|:.....||..
  Rat   131 SLHWVPREGLTII-------NHTELTPVYIRIEGMDSEKTTSWDERDDAPSGSPQNGSTMATGGT 188

Human   206 TPCAER 211
            ....||
  Rat   189 DSLEER 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TCP10LNP_653260.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 3/6 (50%)
Leucine-zipper 75..96 10/20 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..215 16/62 (26%)
Tcp10bXP_008756981.1 Tcp10_C 296..325 CDD:462118
Tcp10_C 404..432 CDD:462118
Tcp10_C 439..468 CDD:462118
Tcp10_C 474..503 CDD:462118
Blue background indicates that the domain is not in the aligned region.

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