DRSC/TRiP Functional Genomics Resources

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Protein Alignment Evx1 and lms

DIOPT Version :10

Sequence 1:NP_031992.1 Gene:Evx1 / 14028 MGIID:95461 Length:416 Species:Mus musculus
Sequence 2:NP_611491.2 Gene:lms / 37322 FlyBaseID:FBgn0034520 Length:378 Species:Drosophila melanogaster


Alignment Length:321 Identity:92/321 - (28%)
Similarity:125/321 - (38%) Gaps:96/321 - (29%)


- Green bases have known domain annotations that are detailed below.


Mouse   152 SPTSGSEAPKSNGGSGG-------SGSQGTLAC---------------------SASDQMRRYRT 188
            |.||..::.:...|.||       :.|..|.:|                     ...|:.:|.||
  Fly    27 SSTSFEDSVQDESGRGGNCLGASRASSPATSSCLDDNMDDGKSDIDLASDDGNGLGDDRKKRPRT 91

Mouse   189 AFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADP 253
            ||:..||..||.||.|..|:|..:|..||..|.|.||.||:||||||.|.||:            
  Fly    92 AFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRK------------ 144

Mouse   254 AFYT----YMMSHAAA---AGGLPYPF------------PSHLPLPYYSPV--GLGAASAASAAA 297
              ||    .:.||..|   .|||..|.            |:. |.|..|.:  |.|:|:..::|.
  Fly   145 --YTSDVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTG-PTPIQSIMLNGSGSAAPMASAT 206

Mouse   298 SPFSGPLRPLDTFRVLSQPYPRPELLCAFRHPPLYPGPAHGLGASAAAAAAAGPCSCLACHSG-- 360
            :....|:||..|...:               ||| |||:....|..|..|...|.: .|...|  
  Fly   207 TATGSPMRPYATSGGM---------------PPL-PGPSVMESARNAILARGQPLN-FALPFGVA 254

Mouse   361 --PANGL-----APRAAAAAAASDFTCASTSRSDSFL-----TFAPSVLSKASS-VAALDQ 408
              ||.|:     .||....|.:.....||...::|:|     |..|...|.||: :|.|::
  Fly   255 KPPAGGVPAASYIPRCKPYATSYVDYAASLPTNESYLQMKYATLPPEAESGASNGLAELER 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Evx1NP_031992.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..120
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 138..178 9/53 (17%)
Homeodomain 184..240 CDD:459649 30/55 (55%)
lmsNP_611491.2 Cnd2 33..>106 CDD:450400 17/72 (24%)
Homeodomain 87..143 CDD:459649 30/55 (55%)
Blue background indicates that the domain is not in the aligned region.

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