Sequence 1: | NP_001138818.1 | Gene: | RBMXL3 / 139804 | HGNCID: | 26859 | Length: | 1067 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_011675.1 | Gene: | NSR1 / 853064 | SGDID: | S000003391 | Length: | 414 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 288 | Identity: | 70/288 - (24%) |
---|---|---|---|
Similarity: | 114/288 - (39%) | Gaps: | 68/288 - (23%) |
- Green bases have known domain annotations that are detailed below.
Human 3 EADRPEKLFIGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAAR 67
Human 68 DMNGKYLDGKAIMV-AQTIKPAFKSSR--WVPPTPGSGSRSRF------------------SHRT 111
Human 112 RGGGSSPQRPPSQGRPDDGRGYAGYFDLWPYRAPMPRKRG------PPPRHWASPPHKRATPSSL 170
Human 171 AHSVGCGMRGKAPTVSGQDGYSGLQPRRWAGPPHKRAVPRSSLARIGGSGMPGKAPAVWGQDGY- 234
Human 235 ---SGPRVREPLPPCRDPGDFVPALRDY 259 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RBMXL3 | NP_001138818.1 | RRM | <1..>81 | CDD:223796 | 28/77 (36%) |
RRM_RBMX_like | 7..86 | CDD:240828 | 28/79 (35%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 90..131 | 9/60 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 144..175 | 5/36 (14%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 267..305 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 357..1067 | ||||
NSR1 | NP_011675.1 | RRM1_gar2 | 169..244 | CDD:409881 | 26/74 (35%) |
RRM2_gar2 | 269..341 | CDD:409882 | 10/73 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I2660 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |